RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 ZNF783Q6ZMS7 281 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 IGFN1Q86VF2 1251 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ANKRD13BQ86YJ7 626 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DCP2Q8IU60 420 aaKnown RBP6.49□□□□□ -1.37
CSDE1-205ENST00000438362 MAPKAP1Q9BPZ7 522 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 BCL7BQ9BQE9 202 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SYT17Q9BSW7 474 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 EHD1Q9H4M9 534 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 GORASP2Q9H8Y8 452 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 IL17CQ9P0M4 197 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 ABCD2Q9UBJ2 740 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 DUX4Q9UBX2 424 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 SPATA2Q9UM82 520 aa6.49□□□□□ -1.37
CSDE1-205ENST00000438362 CROCCQ5TZA2 2017 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ISPDA4D126 451 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 MYADML2A6NDP7 307 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 FABP12A6NFH5 140 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DRGXA6NNA5 263 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 HHLA1C9JL84 531 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ITIH1P19827 911 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ACRV1P26436 265 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 HOXC13P31276 330 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 HNF1BP35680 557 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 GJA5P36382 358 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 RAB25P57735 213 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF45Q02386 682 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TARDBPQ13148 414 aaKnown RBP eCLIP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SGCGQ13326 291 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 CBX2Q14781 532 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DDI2Q5TDH0 399 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF697Q5TEC3 545 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SDE2Q6IQ49 451 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SHQ1Q6PI26 577 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SERPINA13PQ6UXR4 307 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PIWIL3Q7Z3Z3 882 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TSPYL5Q86VY4 417 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 GALNT13Q8IUC8 556 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SLC30A8Q8IWU4 369 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 C10orf53Q8N6V4 93 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 OR5AK3PQ8NH89 298 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF671Q8TAW3 534 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 NETO1Q8TDF5 533 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 KLHL6Q8WZ60 621 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 RAD51AP1Q96B01 352 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PKP4Q99569 1192 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 POLE4Q9NR33 117 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 RPS6KB2Q9UBS0 482 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SARDHQ9UL12 918 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 HCN4Q9Y3Q4 1203 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PHIPQ8WWQ0 1821 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 A0A1B0GTW7 788 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PLOD3O60568 738 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 STC2O76061 302 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SBK3P0C264 359 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 CD72P21854 359 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PIK3CBP42338 1070 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 GJA8P48165 433 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 PPP5CP53041 499 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DSTNP60981 165 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ST3GAL4Q11206 333 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 CRHR2Q13324 411 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SP140Q13342 867 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 IL18Q14116 193 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SMU1Q2TAY7 513 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 C9orf64Q5T6V5 341 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF730Q6ZMV8 503 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 OOSP2Q86WS3 158 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 LRRC17Q8N6Y2 441 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 CHDHQ8NE62 594 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 MDGA1Q8NFP4 955 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 NFKBIDQ8NI38 313 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF461Q8TAF7 563 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SLC22A17Q8WUG5 538 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SLC39A13Q96H72 371 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DMRTB1Q96MA1 342 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 WRAP53Q9BUR4 548 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 HERC2P3Q9BVR0 1158 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 BOCQ9BWV1 1114 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 BRINP2Q9C0B6 783 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SP140LQ9H930 580 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ANKRA2Q9H9E1 313 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 DCAF13Q9NV06 445 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 SPATA7Q9P0W8 599 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TBC1D14Q9P2M4 693 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ENPP5Q9UJA9 477 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 MAN2B2Q9Y2E5 1009 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TBC1D3BA6NDS4 549 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF840PA6NDX5 716 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TARM1B6A8C7 271 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 TLR4O00206 839 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 LSM1O15116 133 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ALPLP05186 524 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 LAG3P18627 525 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 XKP51811 444 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 RPS3AP61247 264 aaKnown RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 STX4Q12846 297 aa6.48□□□□□ -1.37
CSDE1-205ENST00000438362 ZNF630Q2M218 657 aaPredicted RBP6.48□□□□□ -1.37
CSDE1-205ENST00000438362 CRTC2Q53ET0 693 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms