RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 OR8H3Q8N146 312 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 CCDC185Q8N715 623 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TMEM99Q8N816 258 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 CCDC63Q8NA47 563 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 OR7A2PQ8NGA2 310 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 OR11H4Q8NGC9 324 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 OR6S1Q8NH40 331 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 GATAD1Q8WUU5 269 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 CKAP2Q8WWK9 683 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 NSMAFQ92636 917 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ZNF501Q96CX3 271 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 LINC00615Q96LM1 132 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 CCDC114Q96M63 670 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 PSMB7Q99436 277 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 OPRPNQ99935 248 aaPredicted RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 FSD1Q9BTV5 496 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 MCRIP2Q9BUT9 160 aaKnown RBP1.9□□□□□ -2.11
CDC40-204ENST00000431461 WWTR1Q9GZV5 400 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 FZD8Q9H461 694 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 C10orf88Q9H8K7 445 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 MED20Q9H944 212 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 FGF22Q9HCT0 170 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 A4GALTQ9NPC4 353 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ATAD3AQ9NVI7 634 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 BARHL2Q9NY43 387 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 SLCO1C1Q9NYB5 712 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 PRDM4Q9UKN5 801 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ITGA11Q9UKX5 1188 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 TNNQ9UQP3 1299 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 WDR83OSQ9Y284 106 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 ITM2BQ9Y287 266 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 WDR37Q9Y2I8 494 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 POMT1Q9Y6A1 747 aa1.9□□□□□ -2.11
CDC40-204ENST00000431461 IGKV3D-15A0A087WSY6 115 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 A0A0B4J203 849 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 C15orf61A6NNL5 157 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 PI4K2BG5E9Z4 385 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 H0Y626 953 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SLC33A1O00400 549 aaPredicted RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 FLRT2O43155 660 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 DCXO43602 365 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 MTRF1O75570 445 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 GRAP2O75791 330 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SLCO2B1O94956 709 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SLU7O95391 586 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 SEC24AO95486 1093 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ACSL3O95573 720 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 RLN1P04808 185 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 PATE4P0C8F1 98 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 CEACAM1P13688 526 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 JAK1P23458 1154 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ELAVL4P26378 380 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 NPBWR1P48145 328 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 DNA2P51530 1060 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 NDST2P52849 883 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SNU13P55769 128 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 CLDN17P56750 224 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 GNB1P62873 340 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 TSPY1Q01534 308 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 MZT1Q08AG7 82 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ZNF415Q09FC8 603 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 CETN1Q12798 172 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SRSF9Q13242 221 aaKnown RBP eCLIP1.89□□□□□ -2.11
CDC40-204ENST00000431461 TAB1Q15750 504 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SLC1A5Q15758 541 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ZNF74Q16587 644 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SPDYCQ5MJ68 293 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 FAM182AQ5T1J6 154 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ARHGAP17Q68EM7 881 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 C15orf39Q6ZRI6 1047 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ZER1Q7Z7L7 766 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 PRUNE1Q86TP1 453 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 KLHL7Q8IXQ5 586 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 GPC2Q8N158 579 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 TMCO5AQ8N6Q1 288 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 TMEM178AQ8NBL3 297 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SLC37A3Q8NCC5 494 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 OR10Q1Q8NGQ4 319 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 OR1L3Q8NH93 324 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 PYCR2Q96C36 320 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SENP5Q96HI0 755 aaPredicted RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 NSMCE3Q96MG7 304 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SPATA33Q96N06 139 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 TSSK2Q96PF2 358 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 IL12RB2Q99665 862 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 SYT15Q9BQS2 421 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 HOXD1Q9GZZ0 328 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ZNF696Q9H7X3 374 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 VIPAS39Q9H9C1 493 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 RPF1Q9H9Y2 349 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 TUFT1Q9NNX1 390 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 ZNF71Q9NQZ8 489 aaPredicted RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 INTS9Q9NV88 658 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 TMEM161AQ9NX61 479 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 DDX43Q9NXZ2 648 aaKnown RBP1.89□□□□□ -2.11
CDC40-204ENST00000431461 LNPEPQ9UIQ6 1025 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 FBXL4Q9UKA2 621 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 AGTPBP1Q9UPW5 1226 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 LIPT1Q9Y234 373 aa1.89□□□□□ -2.11
CDC40-204ENST00000431461 TMED3Q9Y3Q3 217 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms