RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 ACPTQ9BZG2 426 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 THAP2Q9H0W7 228 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 RNF121Q9H920 327 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 RAVER2Q9HCJ3 691 aaKnown RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 IL1RAPL2Q9NP60 686 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 CHST11Q9NPF2 352 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ADPRHL2Q9NX46 363 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 TMEM161AQ9NX61 479 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 TMOD3Q9NYL9 352 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR6C2Q9NZP2 312 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF624Q9P2J8 865 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 KCNG2Q9UJ96 466 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 FBXL5Q9UKA1 691 aa3.49□□□□□ -1.85
HMGB1P17-201ENST00000403495 SCN5AQ14524 2016 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRBV5-5A0A0J9YX44 114 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 C5orf51A6NDU8 294 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 GLTPD2A6NH11 291 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ERVV-2B6SEH9 535 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 RTCAO00442 366 aaKnown RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 KCNAB3O43448 404 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 AKAP3O75969 853 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 MOCS2O96007 188 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CALCAP01258 141 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PRSS1P07477 247 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PAX1P15863 534 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CYP2A7P20853 494 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CTNNB1P35222 781 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ALDH3A2P51648 485 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PHEXP78562 749 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ACCSLQ4AC99 568 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ODF2Q5BJF6 829 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 FFAR4Q5NUL3 377 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CCNYL2Q5T2Q4 361 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 FUT10Q6P4F1 479 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 RAPH1Q70E73 1250 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 BTN2A1Q7KYR7 527 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ANKRD46Q86W74 232 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 C4orf19Q8IY42 314 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ARL10Q8N8L6 244 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 AMER3Q8N944 861 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR10V1Q8NGI7 309 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 OR4C15Q8NGM1 316 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 UBLCP1Q8WVY7 318 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 METTL21AQ8WXB1 218 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PIK3R3Q92569 461 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 RFT1Q96AA3 541 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CENPTQ96BT3 561 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 NECTIN4Q96NY8 510 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PANX3Q96QZ0 392 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ATG101Q9BSB4 218 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ALKBH7Q9BT30 221 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 MRPL9Q9BYD2 267 aaKnown RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 PANK2Q9BZ23 570 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 SDCBP2Q9H190 292 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 P2RY12Q9H244 342 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CPVLQ9H3G5 476 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 CUEDC2Q9H467 287 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 ATP13A3Q9H7F0 1226 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLCO1C1Q9NYB5 712 aa3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 AKAP7Q9P0M2 348 aaPredicted RBP3.48□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRBV4-1A0A0J9YWV2 114 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 MTMR11A4FU01 709 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 FAM172BPA6NC97 362 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SDR42E2A6NKP2 422 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 PMS2P5A8MQ11 134 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 TMEM150CB9EJG8 249 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF195O14628 629 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 KERAO60938 352 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ATP9AO75110 1047 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 CDC123O75794 336 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 DFFBO76075 338 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZNF432O94892 652 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 NADKO95544 446 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 C9P02748 559 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 FAM157CP0CG43 387 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 C8orf89P0DMQ9 161 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ERVK-10P10266 1014 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 P4HA1P13674 534 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 CD59P13987 128 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 TIMP3P35625 211 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SERPINH1P50454 418 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SMSP52788 366 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SNU13P55769 128 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 STX1BP61266 288 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 BTG1P62324 171 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 POU3F1Q03052 451 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ABRQ12979 859 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 RPA4Q13156 261 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 HFEQ30201 348 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 KIAA1644Q3SXP7 199 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 IFI44LQ53G44 452 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SPOUT1Q5T280 376 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 LCN1P1Q5VSP4 162 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC35E4Q6ICL7 350 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 FAM53AQ6NSI3 398 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 TRMT1LQ7Z2T5 733 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 CPEB2Q7Z5Q1 589 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 ZC3H3Q8IXZ2 948 aaKnown RBP3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 TMEM178AQ8NBL3 297 aa3.47□□□□□ -1.85
HMGB1P17-201ENST00000403495 SLC37A3Q8NCC5 494 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms