RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 TNMDQ9H2S6 317 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 RPF1Q9H9Y2 349 aaKnown RBP2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 EXOC1Q9NV70 894 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 ANO10Q9NW15 660 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 P4HTMQ9NXG6 502 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 APPL1Q9UKG1 709 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 ODF2LQ9ULJ1 636 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 TAF1P21675 1872 aa2.69□□□□□ -1.98
TRAJ40-201ENST00000390497 A0A0G2JLW4 131 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TRBV2A0A0J9YWF9 115 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 MAGEB16A2A368 324 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 FAM172BPA6NC97 362 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PRSS46E5RG02 174 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 KLF11O14901 512 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 FGF17O60258 216 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 BAG3O95817 575 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PAK4O96013 591 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 CRYAAP02489 173 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 HMOX1P09601 288 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 F3P13726 295 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 FERP16591 822 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TYMPP19971 482 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 ITGA3P26006 1051 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 CEACAM8P31997 349 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 SERPINB6P35237 376 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 NANOS2P60321 138 aaKnown RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TEAD2Q15562 447 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 XKR6Q5GH73 641 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 FGD3Q5JSP0 725 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 ZNF324BQ6AW86 544 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 RAB12Q6IQ22 244 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PODNL1Q6PEZ8 512 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 CD164L2Q6UWJ8 174 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TOM1L2Q6ZVM7 507 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 IL17RELQ6ZVW7 336 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 FAM89BQ8N5H3 189 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 NIPA2Q8N8Q9 360 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 GBP7Q8N8V2 638 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 KIAA0895Q8NCT3 520 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 OR10Q1Q8NGQ4 319 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 ST7LQ8TDW4 575 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 AP2M1Q96CW1 435 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PANX3Q96QZ0 392 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 RASL10BQ96S79 203 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 NDNQ99608 321 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PRMT1Q99873 361 aaKnown RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 OSBPL8Q9BZF1 889 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TSPYL1Q9H0U9 437 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 CUEDC2Q9H467 287 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 BICC1Q9H694 974 aaKnown RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PNPLA3Q9NST1 481 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 OR6C2Q9NZP2 312 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 AKAP7Q9P0M2 348 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TRIM10Q9UDY6 481 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 HOOK1Q9UJC3 728 aaKnown RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 PRDM4Q9UKN5 801 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TSPAN16Q9UKR8 245 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TDRKHQ9Y2W6 561 aaKnown RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 MTF2Q9Y483 593 aaPredicted RBP2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 TTC3P53804 2025 aa2.68□□□□□ -1.98
TRAJ40-201ENST00000390497 DHX29Q7Z478 1369 aaKnown RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 A0A087X0K7 114 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 IGHV4-61A0A0C4DH41 118 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 RNF103-CHMP3A0A140T963 221 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 C2orf92A0A1B0GVN3 265 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 SMIM30A4D0T7 59 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 EME2A4GXA9 379 aaPredicted RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 RNF103O00237 685 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 GAS8O95995 478 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 IGHV4-59P01825 116 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 VTNP04004 478 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 RAF1P04049 648 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 PRSS1P07477 247 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 FRMD6-AS1P0C7T7 363 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 PRKAR1AP10644 381 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 CPA3P15088 417 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 ZNF18P17022 549 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 LHCGRP22888 699 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 ELAVL4P26378 380 aaKnown RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 CCKARP32238 428 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 DCTP40126 519 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 OR3A1P47881 315 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 GAS1P54826 345 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 UCP2P55851 309 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 B3GALT5-AS1P59052 145 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 STARD6P59095 220 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 RPP38P78345 283 aaKnown RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 IRX4P78413 519 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 SLC3A1Q07837 685 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 ILF3Q12906 894 aaKnown RBP eCLIP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 LASP1Q14847 261 aaKnown RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 HERC3Q15034 1050 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 PKN2Q16513 984 aaKnown RBP2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 ACKR1Q16570 336 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 UGP2Q16851 508 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 IFI44LQ53G44 452 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 PARP10Q53GL7 1025 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 ARMCX4Q5H9R4 360 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 TOR1AIP1Q5JTV8 583 aa2.67□□□□□ -1.98
TRAJ40-201ENST00000390497 SLC35E4Q6ICL7 350 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms