RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 VSX2P58304 361 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-205ENST00000376492 DHX9Q08211 1270 aaKnown RBP12.5□□□□□ -0.41
CLCN6-205ENST00000376492 GRB7Q14451 532 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 INAQ16352 499 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 LONRF1Q17RB8 773 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 MSS51Q4VC12 460 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 PTRHD1Q6GMV3 140 aaKnown RBP12.5□□□□□ -0.41
CLCN6-205ENST00000376492 FRMPD2BQ6IN97 320 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 EMBQ6PCB8 327 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 TMEM207Q6UWW9 146 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 CENPUQ71F23 418 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 LMNTD2Q8IXW0 634 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 KBTBD2Q8IY47 623 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 ZNF295-AS1Q8N0V1 137 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 PDIK1LQ8N165 341 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 TTC29Q8NA56 475 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-205ENST00000376492 STT3BQ8TCJ2 826 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 ASZ1Q8WWH4 475 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 SNF8Q96H20 258 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 PANX3Q96QZ0 392 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 TRIM51Q9BSJ1 452 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 CHST11Q9NPF2 352 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 GNPTGQ9UJJ9 305 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 C3orf18Q9UK00 162 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 VPS9D1Q9Y2B5 631 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 SNRNP200O75643 2136 aaKnown RBP12.5□□□□□ -0.41
CLCN6-205ENST00000376492 PKDREJQ9NTG1 2253 aa12.5□□□□□ -0.41
CLCN6-205ENST00000376492 TRAV17A0A0B4J275 112 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 FITM1A5D6W6 292 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 H3BMM5 538 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 C19orf84I3L1E1 186 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 FFAR3O14843 346 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 KPNA5O15131 536 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 GPR42O15529 346 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ESR1P03372 595 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 APOA4P06727 396 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ZGLP1P0C6A0 271 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 RHOXF2BP0C7M4 288 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 H2AFXP16104 143 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CD9P21926 228 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CARSP49589 748 aaKnown RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ITGA8P53708 1063 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ADORA2A-AS1P86434 159 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 PMP22Q01453 160 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 GUCY2DQ02846 1103 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 EEF1A2Q05639 463 aaKnown RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CALCOCO2Q13137 446 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 THOC5Q13769 683 aaKnown RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CDSNQ15517 529 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 VWA2Q5GFL6 755 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ZC3H12BQ5HYM0 836 aaKnown RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 TCTE1Q5JU00 501 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CTSL3PQ5NE16 218 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 YOD1Q5VVQ6 348 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ATG9BQ674R7 924 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 FIGLAQ6QHK4 219 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 LAPTM4BQ86VI4 370 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 IGDCC3Q8IVU1 814 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 SLC22A15Q8IZD6 547 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 KRT222Q8N1A0 295 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 OTUD6BQ8N6M0 293 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CFAP61Q8NHU2 1237 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 LKAAEAR1Q8TD35 194 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CALML6Q8TD86 181 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 MIEF2Q96C03 454 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 LRRC39Q96DD0 335 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 VPS50Q96JG6 964 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 RHOXF2Q9BQY4 288 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 INTS10Q9NVR2 710 aaKnown RBP12.49□□□□□ -0.41
CLCN6-205ENST00000376492 IL1RAPL1Q9NZN1 696 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 SEC14L3Q9UDX4 400 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 ITPR3Q14573 2671 aa12.49□□□□□ -0.41
CLCN6-205ENST00000376492 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 NSG1A0A0A6YYJ2 146 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 HYKKA2RU49 373 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 KRT87PA6NCN2 255 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 ATP8B1O43520 1251 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 KDM1AO60341 852 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 WDPCPO95876 746 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 PSMB5P28074 263 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 FMO4P31512 558 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 RPL21P46778 160 aaKnown RBP12.48□□□□□ -0.41
CLCN6-205ENST00000376492 EIF3BP55884 814 aaKnown RBP12.48□□□□□ -0.41
CLCN6-205ENST00000376492 OCA2Q04671 838 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 HSPA14Q0VDF9 509 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 CRYMQ14894 314 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 SF1Q15637 639 aaKnown RBP12.48□□□□□ -0.41
CLCN6-205ENST00000376492 BBS9Q3SYG4 887 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 SPANXN3Q5MJ09 141 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 ZNF470Q6ECI4 717 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 MYO7BQ6PIF6 2116 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 RPTNQ6XPR3 784 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 RELL1Q8IUW5 271 aa12.48□□□□□ -0.41
CLCN6-205ENST00000376492 DCUN1D3Q8IWE4 304 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms