RNA–Protein interactions for RNA: ENST00000374399.8

NIPAL3-204, Transcript of NIPA like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPAL3, Length 1,711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-204ENST00000374399 STX5Q13190 355 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 SRSF5Q13243 272 aaKnown RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 MDC1Q14676 2089 aaKnown RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 C10orf62Q5T681 223 aaPredicted RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 NOXRED1Q6NXP6 359 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 WDR5BQ86VZ2 330 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.08■□□□□ 0
NIPAL3-204ENST00000374399 ULK2Q8IYT8 1036 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 EFCAB3Q8N7B9 438 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 OR2L3Q8NG85 312 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 TSPEARQ8WU66 669 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 VPS33AQ96AX1 596 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 REPS1Q96D71 796 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 SPDL1Q96EA4 605 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 TMEM74Q96NL1 305 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 MRPL1Q9BYD6 325 aaKnown RBP15.08■□□□□ 0
NIPAL3-204ENST00000374399 CPNE7Q9UBL6 633 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 PPT2Q9UMR5 302 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 TMED5Q9Y3A6 229 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 PCDHGA7Q9Y5G6 932 aa15.08■□□□□ 0
NIPAL3-204ENST00000374399 TMEM131Q92545 1883 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 A0A1W2PP18 115 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 FEZF1A0PJY2 475 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 FXYD1O00168 92 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 VILLO15195 856 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 MGRN1O60291 552 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 HOXB3P14651 431 aaPredicted RBP15.07■□□□□ 0
NIPAL3-204ENST00000374399 PIK3CBP42338 1070 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 PAGE3Q5JUK9 113 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 KIAA1614Q5VZ46 1190 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 FBXW10Q5XX13 1052 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 CYB5D1Q6P9G0 228 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 PGAM4Q8N0Y7 254 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 CLHC1Q8NHS4 586 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 MCUR1Q96AQ8 359 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 EGLN2Q96KS0 407 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 DENND2DQ9H6A0 471 aaPredicted RBP15.07■□□□□ 0
NIPAL3-204ENST00000374399 NT5DC2Q9H857 520 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 SLC7A8Q9UHI5 535 aa15.07■□□□□ 0
NIPAL3-204ENST00000374399 KIR2DS5A0A0G2JLQ3 304 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 A0A0G2JNG1 304 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 KIR2DS3K7RE56 304 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 MRASO14807 208 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 EEDO75530 441 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 TGFB1P01137 390 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 EZRP15311 586 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 CLDN8P56748 225 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 KIR2DS5Q14953 304 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 HIST2H2ACQ16777 129 aaPredicted RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 HIST2H2AA3Q6FI13 130 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 HACD2Q6Y1H2 254 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 PLD3Q8IV08 490 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 RIMKLAQ8IXN7 391 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 C10orf67Q8IYJ2 551 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 C1orf52Q8N6N3 182 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 WDR60Q8WVS4 1066 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 ZFPM2Q8WW38 1151 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 NELL1Q92832 810 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 METTL2AQ96IZ6 378 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 AIF1LQ9BQI0 150 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 OR51B5Q9H339 312 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 CLMPQ9H6B4 373 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 WDR41Q9HAD4 459 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 POT1Q9NUX5 634 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 SIRT5Q9NXA8 310 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 CACNA1EQ15878 2313 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 VPS13AQ96RL7 3174 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 OR5K4A6NMS3 321 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 BBIP1A8MTZ0 92 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 BCAT2O15382 392 aaPredicted RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 YY2O15391 372 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 VIPP01282 170 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 PRPS2P11908 318 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 DGKQP52824 942 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 PHC1P78364 1004 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 COQ5Q5HYK3 327 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 CACHD1Q5VU97 1274 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 ZNF425Q6IV72 752 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 GALNT18Q6P9A2 607 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 C16orf89Q6UX73 402 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 SCUBE1Q8IWY4 988 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 KRT78Q8N1N4 520 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 TMEM105Q8N8V8 129 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 FAM46DQ8NEK8 389 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 ZDHHC1Q8WTX9 485 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 UBE2E3Q969T4 207 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 TSSK3Q96PN8 268 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 OR2A14Q96R47 310 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 GPATCH1Q9BRR8 931 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 EBPLQ9BY08 206 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 ZNF717Q9BY31 904 aaPredicted RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 AICDAQ9GZX7 198 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 SRMSQ9H3Y6 488 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 MRPS30Q9NP92 439 aaKnown RBP15.06■□□□□ 0
NIPAL3-204ENST00000374399 SLAMF8Q9P0V8 285 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 PACSIN3Q9UKS6 424 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 KLHL20Q9Y2M5 609 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 NDUFAF1Q9Y375 327 aa15.06■□□□□ 0
NIPAL3-204ENST00000374399 GOLGA4Q13439 2230 aaKnown RBP15.05■□□□□ 0
NIPAL3-204ENST00000374399 KDM1AO60341 852 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms