RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 KIAA0513O60268 411 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 C9P02748 559 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 PRKAR2AP13861 404 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 PPP2R2BQ00005 443 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 TTC23LQ6PF05 361 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 USP45Q70EL2 814 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 RAB43Q86YS6 212 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 ZZZ3Q8IYH5 903 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 DEPDC4Q8N2C3 294 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC5A8Q8N695 610 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 NFKBIDQ8NI38 313 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 FOXJ1Q92949 421 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 HEBP1Q9NRV9 189 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 ELOVL2Q9NXB9 296 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SLCO3A1Q9UIG8 710 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 AP3M1Q9Y2T2 418 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 PCDHGB3Q9Y5G1 929 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SSC5DA1L4H1 1573 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 H7C4K7 107 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 ETFAP13804 333 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 LIPAP38571 399 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 RPS26P62854 115 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 GRSF1Q12849 480 aaKnown RBP eCLIP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 OXA1LQ15070 435 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 TYSND1Q2T9J0 566 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 ZNF284Q2VY69 593 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 XKR7Q5GH72 579 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 RFLNAQ6ZTI6 216 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 RNF180Q86T96 592 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 HJURPQ8NCD3 748 aaPredicted RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 FBXO22Q8NEZ5 403 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.192e-7■■■■■ 66
CSNK1D-202ENST00000314028 SLC39A13Q96H72 371 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 MROQ9BYG7 248 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 KCNH6Q9H252 994 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 NECTIN3Q9NQS3 549 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 STARD7Q9NQZ5 370 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 VPS29Q9UBQ0 182 aa13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 MRPS7Q9Y2R9 242 aaKnown RBP13.88□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC35F4A4IF30 521 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 KPNA3O00505 521 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 KDELR3O43731 214 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 GADD45GO95257 159 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 STATHP02808 62 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 FHP07954 510 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 EBLN1P0CF75 366 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 SDC1P18827 310 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 IL12RB1P42701 662 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 NKX3-2P78367 333 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 MAD2L1BPQ15013 274 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 RTP2Q5QGT7 225 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 DPP10Q8N608 796 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 GPR150Q8NGU9 434 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 DNASE1L2Q92874 299 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 MGME1Q9BQP7 344 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 OR51B5Q9H339 312 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 TVP23BQ9NYZ1 205 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ARID1AO14497 2285 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PLOD3O60568 738 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PQBP1O60828 265 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 CATP04040 527 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PSMA1P25786 263 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 SSTR4P31391 388 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 KRT33BQ14525 404 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 DUOXA1Q1HG43 343 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ATG9BQ674R7 924 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 LRRC66Q68CR7 880 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 SBSNQ6UWP8 590 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 AQP11Q8NBQ7 271 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PPCDCQ96CD2 204 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 C8orf48Q96LL4 319 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 COQ7Q99807 217 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PTPN18Q99952 460 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 KATNBL1Q9H079 304 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 TRIT1Q9H3H1 467 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 IL26Q9NPH9 171 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ATP6V1HQ9UI12 483 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 LYVE1Q9Y5Y7 322 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ILVBLA1L0T0 632 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 B4GALT3O60512 393 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 CPNE3O75131 537 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PRPS1L1P21108 318 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 HNF1BP35680 557 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 FCGRTP55899 365 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 SRP54P61011 504 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ACOX1Q15067 660 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 SERPINA13PQ6UXR4 307 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 CSGALNACT1Q8TDX6 532 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 MRPS31Q92665 395 aaKnown RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 RHBDF1Q96CC6 855 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 CENPOQ9BU64 300 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 ACTL8Q9H568 366 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PAQR5Q9NXK6 330 aaPredicted RBP13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 IL17CQ9P0M4 197 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 DYRK1BQ9Y463 629 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
CSNK1D-202ENST00000314028 OR6C75A6NL08 312 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms