RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 SCN1BQ07699 218 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SMAD4Q13485 552 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 GANABQ14697 944 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 FAM174BQ3ZCQ3 159 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 KLHL26Q53HC5 615 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TSSK4Q6SA08 328 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 OLFML1Q6UWY5 402 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 GALNT10Q86SR1 603 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CAND1Q86VP6 1230 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 RASSF5Q8WWW0 418 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PDLIM2Q96JY6 352 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 C11orf16Q9NQ32 467 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PDP1Q9P0J1 537 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 RPH3AQ9Y2J0 694 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 A0A1B0GTW7 788 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ALOX15BO15296 676 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 OAZ2O95190 189 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SEC24AO95486 1093 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 COL6A2P12110 1019 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 C4BPBP20851 252 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CACNA2D1P54289 1103 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CENPSQ8N2Z9 138 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 OR4K14Q8NGD5 310 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SHKBP1Q8TBC3 707 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PYDC1Q8WXC3 89 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 EDEM2Q9BV94 578 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CXXC1Q9P0U4 656 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 PRODH2Q9UF12 536 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 URB1O60287 2271 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 C11orf98E9PRG8 122 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 RNF13O43567 381 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ECI2O75521 394 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 F10P00742 488 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CHRM1P11229 460 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 AK4P27144 223 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 IL1R2P27930 398 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MAGEA9P43362 315 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MRPS21P82921 87 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 EEF1A2Q05639 463 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 RAB39AQ14964 217 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SGCAQ16586 387 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ZNF311Q5JNZ3 666 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ERICH5Q6P6B1 374 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PPP1R3BQ86XI6 285 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 VN1R2Q8NFZ6 395 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 OR10H4Q8NGA5 316 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SLC35A5Q9BS91 424 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 LRRC4CQ9HCJ2 640 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TRIM39Q9HCM9 518 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 STARD5Q9NSY2 213 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 NOCTQ9UK39 431 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 GJD2Q9UKL4 321 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PRORSD1PA6NEY8 169 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 hCG_2039718K7EN88 272 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CYP17A1P05093 508 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CST5P28325 142 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 HOXA11P31270 313 aaPredicted RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 ARSFP54793 590 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 EMP2P54851 167 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 RPL26P61254 145 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 NFE2L1Q14494 772 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 QPCTQ16769 361 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 FRG2Q64ET8 278 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 MZT2AQ6P582 158 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ARCQ7LC44 396 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 LRRC70Q7Z2Q7 622 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CILP2Q8IUL8 1156 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SLC5A8Q8N695 610 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 OR52E4Q8NGH9 312 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 CEP76Q8TAP6 659 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 SPPL3Q8TCT6 385 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 PIWIL1Q96J94 861 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 FRG2BQ96QU4 278 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TBX5Q99593 518 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 BTBD10Q9BSF8 475 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TDRD1Q9BXT4 1180 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 COMMD4Q9H0A8 199 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 ALG2Q9H553 416 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 TMLHEQ9NVH6 421 aa6.91□□□□□ -1.3
RAG1-201ENST00000299440 RPL26L1Q9UNX3 145 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 AFDNP55196 1824 aaKnown RBP6.91□□□□□ -1.3
RAG1-201ENST00000299440 ADAMTS4O75173 837 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 PRAMEF12O95522 483 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 FABP3P05413 133 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 BCHEP06276 602 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 NR2C1P13056 603 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 MSX2P35548 267 aaPredicted RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 ZNF846Q147U1 533 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 FASTKD3Q14CZ7 662 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 TRMT5Q32P41 509 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 PARM1Q6UWI2 310 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 AGBL5Q8NDL9 886 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 TOR1AIP2Q8NFQ8 470 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 CAVIN3Q969G5 261 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 PTCD3Q96EY7 689 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 RMI1Q9H9A7 625 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 EIF2B3Q9NR50 452 aaKnown RBP6.9□□□□□ -1.3
RAG1-201ENST00000299440 DMAC2Q9NW81 257 aa6.9□□□□□ -1.3
RAG1-201ENST00000299440 TAS2R9Q9NYW1 312 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms