RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 C9orf64Q5T6V5 341 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 ACSM2BQ68CK6 577 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 PARM1Q6UWI2 310 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 ZNF621Q6ZSS3 439 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 FAM9CQ8IZT9 166 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 C1orf52Q8N6N3 182 aaKnown RBP18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 OR56A3Q8NH54 315 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 ATL1Q8WXF7 558 aa18.06■□□□□ 0.48
PDLIM4-201ENST00000253754 A0A1B0GVG6 124 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ASLP04424 464 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 LAMP2P13473 410 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ENGP17813 658 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 PIGAP37287 484 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 CTBSQ01459 385 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ABHD18Q0P651 414 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 RUNX3Q13761 415 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 SPIDRQ14159 915 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 C16orf72Q14CZ0 275 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 CATSPEREQ5SY80 951 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 RAET1GQ6H3X3 334 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ZCCHC8Q6NZY4 707 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 XKR5Q6UX68 686 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 TMPRSS11BQ86T26 416 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 OR7G3Q8NG95 312 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 OR52E4Q8NGH9 312 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 HUS1BQ8NHY5 278 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ZNF480Q8WV37 535 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 SH3KBP1Q96B97 665 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 MBOAT4Q96T53 435 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 RPP25Q9BUL9 199 aaKnown RBP18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 VNN3Q9NY84 501 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 THEGQ9P2T0 379 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 HEMK1Q9Y5R4 338 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 H0YAE9 185 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 H0YIV9 168 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 LILRB5O75023 590 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 C1orf105O95561 183 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ZNF682O95780 498 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 ACPPP15309 386 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 IGFBP4P22692 258 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 TBPL1P62380 186 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 HKDC1Q2TB90 917 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 NLRP8Q86W28 1048 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 HOMEZQ8IX15 550 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 SDCCAG3Q96C92 435 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 C11orf24Q96F05 449 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 HIC2Q96JB3 615 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 NPLQ9BXD5 320 aaPredicted RBP18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 AP3M1Q9Y2T2 418 aa18.05■□□□□ 0.48
PDLIM4-201ENST00000253754 CLIC1O00299 241 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 C6P13671 934 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 PPP2R2BQ00005 443 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 RBBP5Q15291 538 aaKnown RBP18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 CRTC3Q6UUV7 619 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 SYTL1Q8IYJ3 562 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 NRSN1Q8IZ57 195 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 CPA6Q8N4T0 437 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 HCAR2Q8TDS4 363 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 NUS1Q96E22 293 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 MAGEB10Q96LZ2 347 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 FOPNLQ96NB1 174 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 OSBPL10Q9BXB5 764 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 AMBRA1Q9C0C7 1298 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 TUBA8Q9NY65 449 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 EBF1Q9UH73 591 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 PRKAB1Q9Y478 270 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 PCYT1BQ9Y5K3 369 aaPredicted RBP18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 MUC3AQ02505 3323 aa18.04■□□□□ 0.48
PDLIM4-201ENST00000253754 PRNPP04156 253 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GJA4P35212 333 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 HNF4AP41235 474 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 CDK9P50750 372 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 RPS13P62277 151 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 PMS2P3Q13401 168 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 LAPTM4AQ15012 233 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GPR141Q7Z602 305 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 CLVS1Q8IUQ0 354 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 ZNF547Q8IVP9 402 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 PYURFQ96I23 114 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 RIPOR3Q96MK2 946 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 IFT80Q9P2H3 777 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 RUVBL1Q9Y265 456 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 TBC1D3BA6NDS4 549 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 E2F6O75461 281 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 TRMUO75648 421 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GBAP04062 536 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GDI1P31150 447 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 LTBRP36941 435 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 DCTP40126 519 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 GPR1P46091 355 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 MEF2AQ02078 507 aaPredicted RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 SRSF11Q05519 484 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 DYNC1I2Q13409 638 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 STARD3Q14849 445 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 SLCO4C1Q6ZQN7 724 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 CHPFQ8IZ52 775 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 ZCCHC7Q8N3Z6 543 aaKnown RBP18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 SGCDQ92629 289 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 SH3GL3Q99963 347 aa18.03■□□□□ 0.48
PDLIM4-201ENST00000253754 AASDHPPTQ9NRN7 309 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms