RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Slc38a9Q8BGD6 560 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Csgalnact1Q8BJQ9 530 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 TtpaQ8BWP5 278 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 BtdQ8CIF4 520 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 B3gnt7Q8K0J2 397 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Dhcr24Q8VCH6 516 aaKnown RBP15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Cxxc5Q91WA4 317 aaKnown RBP15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Tmem98Q91X86 226 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 PpidQ9CR16 370 aaKnown RBP15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Snx7Q9CY18 387 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Elovl2Q9JLJ4 292 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Vps29Q9QZ88 182 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 B4galt6Q9WVK5 382 aa15.08■□□□□ 0
Vcan-201ENSMUST00000109543 Gm3248K7N721 186 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Ltb4rO88855 351 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Cpa3P15089 417 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Phxr1P15973 60 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 HalP35492 657 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Nr5a2P45448 560 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 MybphP70402 483 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Ebf1Q07802 591 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Ap5b1Q3TAP4 876 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Nt5eQ61503 576 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Ppp2r1bQ7TNP2 601 aaKnown RBP15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Olfr845Q7TRG2 312 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Slco4c1Q8BGD4 722 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Krt75Q8BGZ7 551 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Pgs1Q8BHF7 553 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 GanabQ8BHN3 944 aaKnown RBP15.07■□□□□ 0
Vcan-201ENSMUST00000109543 EtfaQ99LC5 333 aaKnown RBP15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Gkn2Q9CQS6 184 aa15.07■□□□□ 0
Vcan-201ENSMUST00000109543 FarsbQ9WUA2 589 aaKnown RBP15.07■□□□□ 0
Vcan-201ENSMUST00000109543 Gm29776A0A286YEC0 699 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Pramef20B1ARV6 477 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Klhl4B1AZR0 717 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Gm20671F6TVX7 576 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Vmn2r4K7N784 913 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Npc1O35604 1277 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Rhox6O70238 227 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Npy2rP97295 381 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Clca4bQ3UW98 925 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Chst2Q80WV3 530 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Trim50Q810I2 483 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Map4k5Q8BPM2 847 aaKnown RBP15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Ccdc17Q8CE13 565 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 ManbaQ8K2I4 879 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Vmn1r38Q8R2E1 302 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Ints14Q8R3P6 515 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Slc5a9Q8VDT1 685 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Nprl3Q8VIJ8 569 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Klk6Q91Y82 253 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Atg13Q91YI1 516 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Cstf3Q99LI7 717 aaKnown RBP15.06■□□□□ 0
Vcan-201ENSMUST00000109543 1700086D15RikQ9D9E9 151 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 NvlQ9DBY8 855 aaKnown RBP15.06■□□□□ 0
Vcan-201ENSMUST00000109543 CtsjQ9R014 334 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Nlrp1bA1Z198 1177 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Itih4A6X935 942 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Vmn2r90E9PXJ8 863 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Gm10324L7N208 604 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Yap1P46938 488 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Sox2P48432 319 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Kcnj5P48545 419 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 NfycP70353 335 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Bhlha9Q5RJB0 231 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Krt72Q6IME9 520 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Cpsf4Q8BQZ5 211 aaKnown RBP15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Tceal5Q8CCT4 200 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Map2k7Q8CE90 535 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Tram1l1Q8QZR0 363 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Olfr806Q8VFI2 313 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 HnrnpabQ99020 285 aaKnown RBP15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Cyp4f15Q99N18 534 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 TescQ9JKL5 214 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Scamp4Q9JKV5 230 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Slc5a3Q9JKZ2 718 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Rp1l1Q8CGM2 1859 aa15.06■□□□□ 0
Vcan-201ENSMUST00000109543 Gm45233A0A0N4SVE0 221 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Gm35911A0A1D5RLS7 214 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Pkd2l1A2A259 760 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 GmlE9PX31 176 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Vmn2r7E9PYL5 915 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Vmn2r3H3BJ88 915 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Gm8108K7N734 216 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Cldn4O35054 210 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Adh5P28474 374 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Osbp2Q5QNQ6 908 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Abcb7Q61102 752 aaKnown RBP15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Il10raQ61727 575 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 KdsrQ6GV12 332 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Mfsd13aQ6PDE8 519 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Adam29Q811Q4 763 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Efr3aQ8BG67 819 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Gucy1b2Q8BXH3 824 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Tprg1Q8CB49 279 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 BicralQ8CHH5 1074 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Bag5Q8CI32 447 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Isoc1Q91V64 297 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 MtapQ9CQ65 283 aa15.05■□□□□ 0
Vcan-201ENSMUST00000109543 Q9CWU4 180 aaKnown RBP15.05■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms