RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Pik3cbQ8BTI9 1064 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Prdm8Q8BZ97 687 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Gm13278Q8CD73 182 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 GabrpQ8QZW7 440 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Slc38a4Q8R1S9 547 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Cadm1Q8R5M8 456 aaKnown RBP6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Metap1dQ9CPW9 335 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Aff4Q9ESC8 1160 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Fzd2Q9JIP6 570 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Cdc20Q9JJ66 499 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Pkp3Q9QY23 797 aa6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Stau1Q9Z108 487 aaKnown RBP6.97□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Gm4924A0A1B0GR71 966 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Ccdc163A2AGD7 326 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Ttc23lA6H6E9 458 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Zfp952B0V2W4 504 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Dlgap4B1AZP2 992 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Tmem240B2RWJ3 173 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Ccnb1ip1D3Z3K2 276 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Smim18J3QNP2 93 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Vmn2r21K7N6Y7 853 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Vmn2r20L7N2B1 853 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Clk3O35492 638 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Capns1O88456 269 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Acvr1P37172 509 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Cd9P40240 226 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Arpc4P59999 168 aaKnown RBP6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 PrlrQ08501 608 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 MocosQ14CH1 862 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Tgtp2Q3T9E4 415 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Gpr149Q3UVY1 732 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Tmem199Q5SYH2 208 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Lcp2Q60787 533 aaKnown RBP6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Creb3Q61817 404 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Tgtp1Q62293 415 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 BegainQ68EF6 600 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Dlgap3Q6PFD5 977 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Plekha8Q80W71 519 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Ckap4Q8BMK4 575 aaKnown RBP6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Chst8Q8BQ86 417 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Fam221bQ8C627 487 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Plac9Q8K262 108 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Etv3Q8R4Z4 513 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Lsm1Q8VC85 133 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Olfr677Q8VF06 312 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Olfr1047Q8VGS0 319 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Mto1Q923Z3 669 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 MpstQ99J99 297 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Mau2Q9D2X5 619 aaKnown RBP6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Gpr63Q9EQQ3 425 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 AnkhQ9JHZ2 492 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Zbp1Q9QY24 411 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Rps6kb2Q9Z1M4 485 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Htatip2Q9Z2G9 242 aa6.96□□□□□ -1.29
Clrn1-202ENSMUST00000055636 Gm29106A0A087WSP8 697 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Gbp4A4UUI3 631 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Pramef20B1ARV6 477 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Gm10639E9Q6L7 222 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Nkx1-1G3UXB3 402 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Gp1baO35930 734 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 FiglaO55208 194 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Gtf2h4O70422 463 aaKnown RBP6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Dnajb5O89114 348 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Hoxd4P10628 250 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Ptger3P30557 365 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Stfa3P35173 103 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Dsc3P55850 896 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Igfbp5Q07079 271 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Lpcat1Q3TFD2 534 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 March9Q3TZ87 348 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Foxk2Q3UCQ1 651 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Foxr1Q3UTB7 268 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Clca4bQ3UW98 925 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Zbtb2Q3V3W4 514 aaKnown RBP6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Usp7Q6A4J8 1103 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Atg16l2Q6KAU8 623 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Snx31Q6P8Y7 439 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Dsg1bQ7TSF1 1060 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Mfn2Q80U63 757 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Znf750Q8BH05 703 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Cyp20a1Q8BKE6 462 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Rbm34Q8C5L7 375 aaKnown RBP6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 MmaaQ8C7H1 415 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Galnt13Q8CF93 556 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Cpne5Q8JZW4 593 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Gtf2a1lQ8R4I4 468 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Pla2g15Q8VEB4 412 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Oas1hQ8VI97 369 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Ptov1Q91VU8 416 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Syt12Q920N7 421 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Tcf19Q99KJ5 263 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Vmp1Q99KU0 406 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Chaf1bQ9D0N7 572 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 EefsecQ9JHW4 583 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Hey1Q9WV93 299 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Trpm6Q8CIR4 2028 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Lrrc37aB1AWG4 3215 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Rp1l1Q8CGM2 1859 aa6.96□□□□□ -1.3
Clrn1-202ENSMUST00000055636 PtprdQ64487 1912 aa6.95□□□□□ -1.3
Clrn1-202ENSMUST00000055636 Esp31A8R0W3 114 aa6.95□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 60.6 ms