RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 ZNF461Q8TAF7 563 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 C2orf15Q8WU43 125 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 EID2BQ96D98 161 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HSPBAP1Q96EW2 488 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HIST1H2AHQ96KK5 128 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HIST1H2AJQ99878 128 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 H2AFJQ9BTM1 129 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 TTLL2Q9BWV7 592 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 DGCR6LQ9BY27 220 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 UGT2B28Q9BY64 529 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 PRDM14Q9GZV8 571 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 NAA50Q9GZZ1 169 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 CD320Q9NPF0 282 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 IL26Q9NPH9 171 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 IRAK4Q9NWZ3 460 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SRRDQ9UH36 339 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CIDEBQ9UHD4 219 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 LSM7Q9UK45 103 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 ZFC3H1O60293 1989 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 TCRBV5S2A0A599 114 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ELOVL7A1L3X0 281 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 G3V2T6 193 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 K7EPI3 171 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 LSM1O15116 133 aaKnown RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 TBC1D4O60343 1298 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 MTX2O75431 263 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CD160O95971 181 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ANXA5P08758 320 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 RAP2AP10114 183 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 EFNA1P20827 205 aaPredicted RBP5.21□□□□□ -1.58
VAPA-203ENST00000577539 S100A3P33764 101 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 HNF1BP35680 557 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 EPHB3P54753 998 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 PIGFQ07326 219 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 TRAF3Q13114 568 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 NFATC2Q13469 925 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SPIDRQ14159 915 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 RAB39AQ14964 217 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 LAPTM4AQ15012 233 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CYBRD1Q53TN4 286 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CCNYL2Q5T2Q4 361 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 FAM180BQ6P0A1 224 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 DLEU7Q6UYE1 221 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SNX20Q7Z614 316 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SPRED1Q7Z699 444 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SLC22A15Q8IZD6 547 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 TET1Q8NFU7 2136 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 GAB3Q8WWW8 586 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 NRBF2Q96F24 287 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SLC47A1Q96FL8 570 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CLSTN3Q9BQT9 956 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.21□□□□□ -1.58
VAPA-203ENST00000577539 ATG10Q9H0Y0 220 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 FANCEQ9HB96 536 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 LTB4R2Q9NPC1 389 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SLC52A3Q9NQ40 469 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 ELOVL2Q9NXB9 296 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 MTRRQ9UBK8 725 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 CD84Q9UIB8 345 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 SCN4AP35499 1836 aa5.21□□□□□ -1.58
VAPA-203ENST00000577539 A0A1W2PQ67 120 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 KRT87PA6NCN2 255 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SLC28A1O00337 649 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CXCR6O00574 342 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 KLK8O60259 260 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 IGSF6O95976 241 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MSH3P20585 1137 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 GABRR2P28476 465 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 STK19P49842 368 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 CLCN2P51788 898 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 AP1S1P61966 158 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PCBP2Q15366 365 aaKnown RBP eCLIP5.2□□□□□ -1.58
VAPA-203ENST00000577539 ANKRD34AQ69YU3 496 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.2□□□□□ -1.581e-9■■□□□ 14
VAPA-203ENST00000577539 RFLNAQ6ZTI6 216 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 PTRH1Q86Y79 214 aaKnown RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 C8orf59Q8N0T1 100 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 CLRN3Q8NCR9 226 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 APOLD1Q96LR9 279 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 COPS8Q99627 209 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CD244Q9BZW8 370 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ACTL8Q9H568 366 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ATP13A3Q9H7F0 1226 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MAGEE1Q9HCI5 957 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 EMC7Q9NPA0 242 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 HEBP1Q9NRV9 189 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 C1GALT1Q9NS00 363 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CFAP97Q9P2B7 532 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 BAG5Q9UL15 447 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 ORC6Q9Y5N6 252 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 SNX5Q9Y5X3 404 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 DOCK4Q8N1I0 1966 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 FAM155AB1AL88 458 aaPredicted RBP5.2□□□□□ -1.58
VAPA-203ENST00000577539 MANBAO00462 879 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TOR1BO14657 336 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 MAGEB3O15480 346 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TAPBPO15533 448 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 TULP3O75386 442 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 WDR47O94967 919 aa5.2□□□□□ -1.58
VAPA-203ENST00000577539 CPSF4O95639 269 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms