RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 TMEM184CQ9NVA4 438 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 CUEDC1Q9NWM3 386 aaPredicted RBP19.36■□□□□ 0.69
CLK3-225ENST00000569063 P4HTMQ9NXG6 502 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 NSMCE4AQ9NXX6 385 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 GRHL1Q9NZI5 618 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 NXT1Q9UKK6 140 aaKnown RBP19.36■□□□□ 0.69
CLK3-225ENST00000569063 MAU2Q9Y6X3 613 aa19.36■□□□□ 0.69
CLK3-225ENST00000569063 H7BY64 318 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 TXNDC9O14530 226 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 EIF3HO15372 352 aaKnown RBP eCLIP19.35■□□□□ 0.69
CLK3-225ENST00000569063 MMP11P24347 488 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 CCND1P24385 295 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 PGGT1BP53609 377 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 AP1S2P56377 157 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 DCAF10Q5QP82 559 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 GARNL3Q5VVW2 1013 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 PRAMEF13Q5VWM6 474 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 MBOAT1Q6ZNC8 495 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 ZNF572Q7Z3I7 529 aaPredicted RBP19.35■□□□□ 0.69
CLK3-225ENST00000569063 ADCK2Q7Z695 626 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 ARHGEF39Q8N4T4 335 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 METTL27Q8N6F8 245 aaPredicted RBP19.35■□□□□ 0.69
CLK3-225ENST00000569063 PYROXD1Q8WU10 500 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 MVB12AQ96EY5 273 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 CABS1Q96KC9 395 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 PRAP1Q96NZ9 151 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 SGPP1Q9BX95 441 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 CTSFQ9UBX1 484 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 RUVBL1Q9Y265 456 aaKnown RBP19.35■□□□□ 0.69
CLK3-225ENST00000569063 ZNF451Q9Y4E5 1061 aa19.35■□□□□ 0.69
CLK3-225ENST00000569063 AGPSO00116 658 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 HAT1O14929 419 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 ENO2P09104 434 aaPredicted RBP19.34■□□□□ 0.69
CLK3-225ENST00000569063 KCNC4Q03721 635 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 ILF2Q12905 390 aaKnown RBP19.34■□□□□ 0.69
CLK3-225ENST00000569063 HKDC1Q2TB90 917 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 TMEM207Q6UWW9 146 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 CYS1Q717R9 158 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 ANKRD7Q92527 254 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 COL26A1Q96A83 441 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 MCMBPQ9BTE3 642 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 NUDT9Q9BW91 350 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 ATG10Q9H0Y0 220 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 G3BP2Q9UN86 482 aaKnown RBP19.34■□□□□ 0.69
CLK3-225ENST00000569063 CDC14AQ9UNH5 594 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 UTP11Q9Y3A2 253 aaKnown RBP19.34■□□□□ 0.69
CLK3-225ENST00000569063 CCDC88CQ9P219 2028 aa19.34■□□□□ 0.69
CLK3-225ENST00000569063 KCNE1BA0A087WTH5 132 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 A6NL46 340 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 SOX8P57073 446 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 NAE1Q13564 534 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 ZXDCQ2QGD7 858 aaPredicted RBP19.33■□□□□ 0.68
CLK3-225ENST00000569063 LCTLQ6UWM7 567 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 HPS6Q86YV9 775 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 CLEC1AQ8NC01 280 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 SMAD5Q99717 465 aaKnown RBP19.33■□□□□ 0.68
CLK3-225ENST00000569063 TRIM54Q9BYV2 358 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 RAB17Q9H0T7 212 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 SAYSD1Q9NPB0 183 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 SEMA3GQ9NS98 782 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 ARL15Q9NXU5 204 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 GPR83Q9NYM4 423 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 ZNF282Q9UDV7 671 aaPredicted RBP19.33■□□□□ 0.68
CLK3-225ENST00000569063 CDC23Q9UJX2 597 aa19.33■□□□□ 0.68
CLK3-225ENST00000569063 NOVA2Q9UNW9 492 aaKnown RBP19.33■□□□□ 0.68
CLK3-225ENST00000569063 SPTA1P02549 2419 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 MED13Q9UHV7 2174 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 IGLV3-12A0A075B6K2 115 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 FAM95CA0A1B0GW59 222 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 PABPN1LA6NDY0 278 aaKnown RBP19.32■□□□□ 0.68
CLK3-225ENST00000569063 NPPBP16860 134 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 ZNF37AP17032 561 aaPredicted RBP19.32■□□□□ 0.68
CLK3-225ENST00000569063 SSTR1P30872 391 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 RPS15AP62244 130 aaKnown RBP19.32■□□□□ 0.68
CLK3-225ENST00000569063 CAV1Q03135 178 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 OCA2Q04671 838 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 DSG2Q14126 1118 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 CAPN13Q6MZZ7 669 aaPredicted RBP19.32■□□□□ 0.68
CLK3-225ENST00000569063 PLD3Q8IV08 490 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 OR56A3Q8NH54 315 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 STT3BQ8TCJ2 826 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 FBXL8Q96CD0 374 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 THAP11Q96EK4 314 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 PHACTR1Q9C0D0 580 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 RHOJQ9H4E5 214 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 CLMPQ9H6B4 373 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 SOX17Q9H6I2 414 aaPredicted RBP19.32■□□□□ 0.68
CLK3-225ENST00000569063 SMYD2Q9NRG4 433 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 SH2B3Q9UQQ2 575 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 HS3ST3B1Q9Y662 390 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 HEATR5BQ9P2D3 2071 aa19.32■□□□□ 0.68
CLK3-225ENST00000569063 SOCS6O14544 535 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 PRPF4O43172 522 aaKnown RBP eCLIP19.31■□□□□ 0.68
CLK3-225ENST00000569063 ZGLP1P0C6A0 271 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 SAT1P21673 171 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 FBLP22087 321 aaKnown RBP19.31■□□□□ 0.68
CLK3-225ENST00000569063 SLC26A3P40879 764 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 TAS2R39P59534 338 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 CSNK1G2P78368 415 aa19.31■□□□□ 0.68
CLK3-225ENST00000569063 FAM53BQ14153 422 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms