RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 GPS2Q13227 327 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CDK5R2Q13319 367 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CUL1Q13616 776 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 LY6DQ14210 128 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KIR2DS3Q14952 304 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 FASTKD3Q14CZ7 662 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SLC5A12Q1EHB4 618 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KLHL38Q2WGJ6 581 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 DEFB110Q30KQ9 67 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SPANXN3Q5MJ09 141 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ATP1A1-AS1Q5TC04 95 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 STEAP4Q687X5 459 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 FAM199XQ6PEV8 388 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TMEM126BQ8IUX1 230 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CNTN4Q8IWV2 1026 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PDIK1LQ8N165 341 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 C2orf73Q8N5S3 287 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 LSM14AQ8ND56 463 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SPATA4Q8NEY3 305 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 OR2L8Q8NGY9 312 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 OR8K5Q8NH50 307 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 DNAJB8Q8NHS0 232 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 GSDMBQ8TAX9 411 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CD200R1Q8TD46 325 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CALML6Q8TD86 181 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CT55Q8WUE5 264 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SKA2Q8WVK7 121 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 STARD8Q92502 1023 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KCNJ9Q92806 393 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 EXTL1Q92935 676 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PPP1R14AQ96A00 147 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KIAA1143Q96AT1 154 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 WBP1Q96G27 269 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SNF8Q96H20 258 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 MEGF10Q96KG7 1140 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RUFY1Q96T51 708 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 GPR21Q99679 349 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 NAT9Q9BTE0 207 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 AARSD1Q9BTE6 412 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 LHX9Q9NQ69 397 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KLHL20Q9Y2M5 609 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TEX264Q9Y6I9 313 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PCM1Q15154 2024 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZNF891A8MT65 544 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RAD51CO43502 376 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PRICKLE3O43900 615 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PSIP1O75475 530 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ITGB2P05107 769 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PRKAR1AP10644 381 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ERGP11308 486 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 MAGP20916 626 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PSMB5P28074 263 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 OAS2P29728 719 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CASQ1P31415 396 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RORAP35398 523 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 DLSTP36957 453 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ARL4CP56559 192 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 C2orf54Q08AI8 447 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CDC20Q12834 499 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 DNASE1L3Q13609 305 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TBR1Q16650 682 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TAF1BQ53T94 588 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RBM20Q5T481 1227 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 TRMT10BQ6PF06 316 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZNF517Q6ZMY9 492 aaPredicted RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 EXD3Q8N9H8 876 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 HMGCLL1Q8TB92 370 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 UTP4Q969X6 686 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RAD51AP1Q96B01 352 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 LRRC39Q96DD0 335 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CERS2Q96G23 380 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CFAP36Q96G28 342 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 NDNQ99608 321 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 RAB11FIP5Q9BXF6 653 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CHRNA10Q9GZZ6 450 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 CCDC68Q9H2F9 335 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 FANCEQ9HB96 536 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SYTL2Q9HCH5 934 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 KLHL42Q9P2K6 505 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 ZC3H7BQ9UGR2 993 aaKnown RBP5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 PADI1Q9ULC6 663 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 SNX24Q9Y343 169 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 DHRS7Q9Y394 339 aa5.79□□□□□ -1.48
CTDSPL2-204ENST00000558966 MED13Q9UHV7 2174 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 A0A1W2PPV9 198 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 ANKRD34BA5PLL1 514 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 E7ESA3 106 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 MYO1CO00159 1063 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 AHSGP02765 367 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 MT-ND3P03897 115 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 FURINP09958 794 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 FAM87AP0C7U9 286 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 MPC1LP0DKB6 136 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 TCN2P20062 427 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 CYP2A7P20853 494 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 CARSP49589 748 aaKnown RBP5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 CDKN2DP55273 166 aa5.78□□□□□ -1.48
CTDSPL2-204ENST00000558966 ITGA1P56199 1179 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms