RNA–Protein interactions for RNA: ENST00000548211.1

RPAP3-205, Transcript of RNA polymerase II associated protein 3, human

TSL 2

Gene RPAP3, Length 555 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPAP3-205	ENST00000548211	ARCN1	P48444	511 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	GNAQ	P50148	359 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CSRP3	P50461	194 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ATXN3	P54252	364 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CDH15	P55291	814 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	TAS2R38	P59533	333 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	HAND2	P61296	217 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CSNK2A1	P68400	391 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	COG7	P83436	770 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CREB5	Q02930	508 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	FOXM1	Q08050	763 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	SPOCK1	Q08629	439 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	NCBP1	Q09161	790 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ELAVL2	Q12926	359 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	TRDN	Q13061	729 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	NFIL3	Q16649	462 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	IMMT	Q16891	758 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ZFP69	Q49AA0	526 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	FAM133B	Q5BKY9	247 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	MZT2B	Q6NZ67	158 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	SLC46A3	Q7Z3Q1	461 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	HAUS6	Q7Z4H7	955 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	RALGPS2	Q86X27	583 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	LYG1	Q8N1E2	194 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	TTC30B	Q8N4P2	665 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	HDDC3	Q8N4P3	179 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	LEMD2	Q8NC56	503 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	NAXE	Q8NCW5	288 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	RBM15B	Q8NDT2	890 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CSNK2A3	Q8NEV1	391 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CCDC26	Q8TAB7	109 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	SLC44A1	Q8WWI5	657 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ZBTB10	Q96DT7	871 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	RRP36	Q96EU6	259 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	MBOAT7	Q96N66	472 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	JPH2	Q9BR39	696 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	LZTS2	Q9BRK4	669 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	GPR88	Q9GZN0	384 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	PSTPIP2	Q9H939	334 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	BEX4	Q9NWD9	120 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	DNAJB4	Q9UDY4	337 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CACNG5	Q9UF02	275 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	FBXW11	Q9UKB1	542 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	ERVK-11	Q9UQG0	969 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	PIN4	Q9Y237	131 aa	Known RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	KLHL20	Q9Y2M5	609 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	PRG3	Q9Y2Y8	225 aa	Predicted RBP	3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	UBIAD1	Q9Y5Z9	338 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	CEPT1	Q9Y6K0	416 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	THADA	Q6YHU6	1953 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	SPTA1	P02549	2419 aa		3.3	□□□□□ -1.88
RPAP3-205	ENST00000548211	SF3B1	O75533	1304 aa	Known RBP eCLIP	3.29	□□□□□ -1.88	3e-6	■■■■■ 137.9
RPAP3-205	ENST00000548211	LNP1	A1A4G5	178 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	BICDL2	A1A5D9	508 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	BCLAF3	A2AJT9	711 aa	Known RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	VCY	O14598	125 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MEIS2	O14770	477 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	TADA2A	O75478	443 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MLYCD	O95822	493 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CCNE1	P24864	410 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	GDI1	P31150	447 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ELF1	P32519	619 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	KRT9	P35527	623 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	PAPOLA	P51003	745 aa	Known RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	GPC3	P51654	580 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CLDN20	P56880	219 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	SRSF5	Q13243	272 aa	Known RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CEP55	Q53EZ4	464 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CYP4A22	Q5TCH4	519 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ARMC3	Q5W041	872 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	FAAH2	Q6GMR7	532 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	FUT10	Q6P4F1	479 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	PQLC2	Q6ZP29	291 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	NIPA1	Q7RTP0	329 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CATSPER4	Q7RTX7	472 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	SH2D6	Q7Z4S9	175 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	RABEPK	Q7Z6M1	372 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	KBTBD6	Q86V97	674 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ZNF410	Q86VK4	478 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	NRROS	Q86YC3	692 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MAP7D3	Q8IWC1	876 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	RNF168	Q8IYW5	571 aa	Predicted RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ELMOD1	Q8N336	334 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	DEFB124	Q8NES8	71 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	SMARCD2	Q92925	531 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	TAAR8	Q969N4	342 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ARHGEF26	Q96DR7	871 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	PPM1M	Q96MI6	270 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	NUSAP1	Q9BXS6	441 aa	Known RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	UBXN6	Q9BZV1	441 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	GLT8D2	Q9H1C3	349 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	CLMP	Q9H6B4	373 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	LY9	Q9HBG7	655 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	TBC1D22B	Q9NU19	505 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MARCH4	Q9P2E8	410 aa	Predicted RBP	3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MAD2L2	Q9UI95	211 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	ADAM28	Q9UKQ2	775 aa		3.29	□□□□□ -1.88
RPAP3-205	ENST00000548211	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms