RNA–Protein interactions for RNA: ENST00000536545.5

HMGA2-206, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-206ENST00000536545 ACP5P13686 325 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 PPP2CBP62714 309 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 PPP2CAP67775 309 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 GRSF1Q12849 480 aaKnown RBP eCLIP21.89■■□□□ 1.09
HMGA2-206ENST00000536545 CYP2A13Q16696 494 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 UGT8Q16880 541 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 SPIN4Q56A73 249 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 DTWD1Q8N5C7 304 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 HAUS8Q9BT25 410 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 PIF1Q9H611 641 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 RMI1Q9H9A7 625 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 SPATA7Q9P0W8 599 aa21.89■■□□□ 1.09
HMGA2-206ENST00000536545 CFAP20Q9Y6A4 193 aaKnown RBP21.89■■□□□ 1.09
HMGA2-206ENST00000536545 MYO1DO94832 1006 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 B3GALT4O96024 378 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 KIR3DL1P43629 444 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 CLCNKAP51800 687 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 MRPS21P82921 87 aaKnown RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 LAPTM5Q13571 262 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 PGS1Q32NB8 556 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 MTX3Q5HYI7 312 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 TBCELQ5QJ74 424 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 USP30Q70CQ3 517 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 ZNF548Q8NEK5 533 aaPredicted RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 NELL1Q92832 810 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 DNASE1L2Q92874 299 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 GFM2Q969S9 779 aaKnown RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 NR1H4Q96RI1 486 aaPredicted RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 INPP5KQ9BT40 448 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 TRIT1Q9H3H1 467 aaKnown RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 FZD3Q9NPG1 666 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 BATF3Q9NR55 127 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 CNOT11Q9UKZ1 510 aaKnown RBP21.88■■□□□ 1.09
HMGA2-206ENST00000536545 AURKCQ9UQB9 309 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 AP3M1Q9Y2T2 418 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 TSC22D4Q9Y3Q8 395 aa21.88■■□□□ 1.09
HMGA2-206ENST00000536545 GGT1P19440 569 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 HSD17B2P37059 387 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 CYP51A1Q16850 503 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 THEMIS2Q5TEJ8 643 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 DUS1LQ6P1R4 473 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 CHST15Q7LFX5 561 aaPredicted RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 GPR180Q86V85 440 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D21Q8IYX1 336 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 ASB12Q8WXK4 309 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SIPA1Q96FS4 1042 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SH3GL1Q99961 368 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 BTBD1Q9H0C5 482 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SEMA6AQ9H2E6 1030 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SIRT5Q9NXA8 310 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 WDR37Q9Y2I8 494 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 PCDHB14Q9Y5E9 798 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SPTBN5Q9NRC6 3674 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 HNRNPRO43390 633 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 AKAP10O43572 662 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 CDH1P12830 882 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 RPL10P27635 214 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 MAT2AP31153 395 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 TIA1P31483 386 aaKnown RBP eCLIP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SOX11P35716 441 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 SF1Q15637 639 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 IER5LQ5T953 404 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 OR4F3Q6IEY1 312 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 GALNT18Q6P9A2 607 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 ANKRD46Q86W74 232 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 ANKFN1Q8N957 763 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 PAPD5Q8NDF8 572 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 OR7A2PQ8NGA2 310 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 STARD8Q92502 1023 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 NRTNQ99748 197 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 REXO4Q9GZR2 422 aaKnown RBP21.87■■□□□ 1.09
HMGA2-206ENST00000536545 AGPAT4Q9NRZ5 378 aa21.87■■□□□ 1.09
HMGA2-206ENST00000536545 CROCCQ5TZA2 2017 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3DA0A087WVF3 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3IA0A087WXS9 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3EA0A087X179 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3KA0A087X1G2 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3FA6NER0 549 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3LB9A6J9 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 H3BQ06 376 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 SCAMP2O15127 329 aaKnown RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3HP0C7X1 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 UMPSP11172 480 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 BMP2P12643 396 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 ZNF26P17031 533 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 IL10P22301 178 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 CDKN2CP42773 168 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 ASMTP46597 345 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 WNT3P56703 355 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 MRPS35P82673 323 aaKnown RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 MEF2AQ02078 507 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 SRSF11Q05519 484 aaKnown RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 HIST2H2ACQ16777 129 aaPredicted RBP21.86■■□□□ 1.09
HMGA2-206ENST00000536545 PYCR3Q53H96 274 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3GQ6DHY5 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 HIST2H2AA3Q6FI13 130 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3CQ6IPX1 549 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 AMIGO2Q86SJ2 522 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 FAM129CQ86XR2 697 aa21.86■■□□□ 1.09
HMGA2-206ENST00000536545 TBC1D3Q8IZP1 549 aaPredicted RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms