RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 PMS2P54278 862 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 POLE2P56282 527 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 SOX8P57073 446 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ARF3P61204 181 aaPredicted RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 ATP6V0D1P61421 351 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 RPS15AP62244 130 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 C19orf57Q0VDD7 668 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ERV3-1Q14264 604 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 MUM1Q2TAK8 710 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 KBTBD12Q3ZCT8 623 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 NKAIN1Q4KMZ8 207 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 PRAMEF13Q5VWM6 474 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 FRMPD2BQ6IN97 320 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 CAPN13Q6MZZ7 669 aaPredicted RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 ADAMTSL2Q86TH1 951 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 OR4N4Q8N0Y3 316 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 CNPY4Q8N129 248 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ZNF843Q8N446 348 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 NOA1Q8NC60 698 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 PPFIBP2Q8ND30 876 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 OR2Y1Q8NGV0 311 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 FBF1Q8TES7 1133 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ANKRD49Q8WVL7 239 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 PTERQ96BW5 349 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ARHGAP9Q9BRR9 750 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 SEMA4CQ9C0C4 833 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 SLC25A18Q9H1K4 315 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 GPAMQ9HCL2 828 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 TXNDC16Q9P2K2 825 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 DHCR7Q9UBM7 475 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 MTRF1LQ9UGC7 380 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 NXT1Q9UKK6 140 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 CDC14AQ9UNH5 594 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 MTO1Q9Y2Z2 717 aaKnown RBP9.4□□□□□ -0.9
NUP98-220ENST00000533346 PCDHGB7Q9Y5F8 929 aa9.4□□□□□ -0.9
NUP98-220ENST00000533346 ESYT3A0FGR9 886 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 B8ZZF3 427 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PCDH17O14917 1159 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 IGHEP01854 428 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 CYC1P08574 325 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 ANXA5P08758 320 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 STMN1P16949 149 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PHBP35232 272 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 VSX2P58304 361 aaPredicted RBP9.39□□□□□ -0.91
NUP98-220ENST00000533346 RAB10P61026 200 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 CSNK1G2P78368 415 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PCDH1Q08174 1060 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 NAE1Q13564 534 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 IL10RAQ13651 578 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 E2F2Q14209 437 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 LY6DQ14210 128 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PTCHD3Q3KNS1 767 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 TCTN3Q6NUS6 607 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 C16orf46Q6P387 395 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 TTLL10Q6ZVT0 673 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 MED25Q71SY5 747 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 COX15Q7KZN9 410 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 C17orf64Q86WR6 236 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 SPNS2Q8IVW8 549 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 TCAIMQ8N3R3 496 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 TMEM102Q8N9M5 508 aaPredicted RBP9.39□□□□□ -0.91
NUP98-220ENST00000533346 EIF1ADQ8N9N8 165 aaKnown RBP9.39□□□□□ -0.91
NUP98-220ENST00000533346 OR4K3Q96R72 315 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 ACAT2Q9BWD1 397 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 TGIF2Q9GZN2 237 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 SYNPO2LQ9H987 977 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 ARL15Q9NXU5 204 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 IFT80Q9P2H3 777 aaPredicted RBP9.39□□□□□ -0.91
NUP98-220ENST00000533346 COPG2Q9UBF2 871 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 IKZF3Q9UKT9 509 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PCDHGA9Q9Y5G4 932 aaKnown RBP9.39□□□□□ -0.91
NUP98-220ENST00000533346 MED13Q9UHV7 2174 aa9.39□□□□□ -0.91
NUP98-220ENST00000533346 PCSK5Q92824 1860 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 A0A1W2PQ72 361 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 CDC14CA4D256 554 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 EIF4E1BA6NMX2 242 aaKnown RBP9.38□□□□□ -0.91
NUP98-220ENST00000533346 H0YIG0 161 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 H7BY64 318 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 CDC7O00311 574 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 PRPF4O43172 522 aaKnown RBP eCLIP9.38□□□□□ -0.91
NUP98-220ENST00000533346 NRP2O60462 931 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 CNOT3O75175 753 aaKnown RBP9.38□□□□□ -0.91
NUP98-220ENST00000533346 MED26O95402 600 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 CD1DP15813 335 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 CRABP2P29373 138 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 SLC6A12P48065 614 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 SLC12A2P55011 1212 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 RPS18P62269 152 aaKnown RBP9.38□□□□□ -0.91
NUP98-220ENST00000533346 KCNAB2Q13303 367 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 USP10Q14694 798 aaKnown RBP9.38□□□□□ -0.91
NUP98-220ENST00000533346 TGFBIQ15582 683 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 NKG7Q16617 165 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 DEFB109BQ30KR1 87 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 VN1R4Q7Z5H5 301 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 RAB43Q86YS6 212 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 HPS6Q86YV9 775 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 ZNF592Q92610 1267 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 ISL2Q96A47 359 aa9.38□□□□□ -0.91
NUP98-220ENST00000533346 KIAA1191Q96A73 305 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms