RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 MAB21L1Q13394 359 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PTGR1Q14914 329 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PDK3Q15120 406 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PDK4Q16654 411 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 CDO1Q16878 200 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 AP5B1Q2VPB7 878 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PRTGQ2VWP7 1150 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 TMEM41BQ5BJD5 291 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 RARS2Q5T160 578 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 HHATQ5VTY9 493 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 TMEM268Q5VZI3 342 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 ATL3Q6DD88 541 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 AADACL2Q6P093 401 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 BRAT1Q6PJG6 821 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 TRMT10CQ7L0Y3 403 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 PRSS42Q7Z5A4 293 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 ADAMTSL2Q86TH1 951 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 FAM228AQ86W67 206 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 ZDHHC21Q8IVQ6 265 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 CENPLQ8N0S6 344 aaPredicted RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 CRYBG2Q8N1P7 616 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PYROXD2Q8N2H3 581 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 COMMD1Q8N668 190 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 NECAB1Q8N987 351 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 FADS6Q8N9I5 356 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 CCDC63Q8NA47 563 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 OR56B1Q8NGI3 324 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 OR10S1Q8NGN2 331 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 OR2T3Q8NH03 318 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 TSEN15Q8WW01 171 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 PSPC1Q8WXF1 523 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 RLN3Q8WXF3 142 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 APBB2Q92870 758 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 SNRNP40Q96DI7 357 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 ELMOD3Q96FG2 381 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 DTD2Q96FN9 168 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 RPRD1AQ96P16 312 aaPredicted RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 TRNT1Q96Q11 434 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 OR2A14Q96R47 310 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 IFT27Q9BW83 186 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 NUSAP1Q9BXS6 441 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 IFIH1Q9BYX4 1025 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 S1PR5Q9H228 398 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 MMP27Q9H306 513 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 LRRC19Q9H756 370 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 ANKZF1Q9H8Y5 726 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 CNOT10Q9H9A5 744 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 ACTR5Q9H9F9 607 aaPredicted RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 PNRC2Q9NPJ4 139 aaKnown RBP5.69□□□□□ -1.5
SQLE-203ENST00000518931 PKD2L2Q9NZM6 624 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 OR6C3Q9NZP0 311 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 VPS54Q9P1Q0 977 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 KLHL9Q9P2J3 617 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 UPB1Q9UBR1 384 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 POLKQ9UBT6 870 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 UBQLN2Q9UHD9 624 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 FBXW11Q9UKB1 542 aa5.69□□□□□ -1.5
SQLE-203ENST00000518931 PEG3Q9GZU2 1588 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 WRNQ14191 1432 aaPredicted RBP eCLIP5.68□□□□□ -1.5
SQLE-203ENST00000518931 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 A0A1B0GVM2 712 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 HEATR9A2RTY3 570 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 FAM90A8PA6NJQ4 464 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 HIP1O00291 1037 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 XPO1O14980 1071 aaKnown RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 ALOX15BO15296 676 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ZW10O43264 779 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 HCRTR2O43614 444 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SLC25A12O75746 678 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 IFNA2P01563 188 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 CXCL10P02778 98 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SBK2P0C263 348 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 FAM90A13PP0C7W8 464 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 FAM90A24PP0C7X0 464 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 PRKACAP17612 351 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 FMO4P31512 558 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SERPINB6P35237 376 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 GALCP54803 685 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SRP54P61011 504 aaKnown RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 GSTO1P78417 241 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ACSM2AQ08AH3 577 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ZNF177Q13360 481 aaPredicted RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 IL13RA2Q14627 380 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 STK38Q15208 465 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SSX2Q16385 188 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 USH1GQ495M9 461 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 CCDC14Q49A88 953 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 UBAP2Q5T6F2 1119 aaKnown RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 PIP5KL1Q5T9C9 394 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 RNASEH2BQ5TBB1 312 aaKnown RBP5.68□□□□□ -1.5
SQLE-203ENST00000518931 CARD17Q5XLA6 110 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 ACSM2BQ68CK6 577 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 AWAT2Q6E213 333 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 KIAA1328Q86T90 577 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 VPS36Q86VN1 386 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 SCAIQ8N9R8 606 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 OR6S1Q8NH40 331 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 CFAP61Q8NHU2 1237 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 OCC1Q8TAD7 63 aa5.68□□□□□ -1.5
SQLE-203ENST00000518931 RAB3IL1Q8TBN0 382 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms