RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 NUMA1Q14980 2115 aa12.33□□□□□ -0.43
VPS52-218ENST00000482399 GON4LQ3T8J9 2241 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TTC34A8MYJ7 566 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 PRLP01236 227 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 ASGR1P07306 291 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 IFI30P13284 250 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TGM1P22735 817 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 MAPK1P28482 360 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 WEE1P30291 646 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 SUOXP51687 545 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 RACK1P63244 317 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 LAIR1Q6GTX8 287 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TYW3Q6IPR3 259 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 SHQ1Q6PI26 577 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 EIF3MQ7L2H7 374 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 HMGN2P46Q86SG4 172 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TSPAN33Q86UF1 283 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 LGI4Q8N135 537 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 BEND7Q8N7W2 519 aaPredicted RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 PHF10Q8WUB8 498 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 NECTIN4Q96NY8 510 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TM9SF3Q9HD45 589 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 MS4A12Q9NXJ0 267 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 ZNF639Q9UID6 485 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 UGT2A1Q9Y4X1 527 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 TAPBPO15533 448 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 KIAA0513O60268 411 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 ALDH2P05091 517 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 FHP07954 510 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 ALDH9A1P49189 494 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 NKX3-2P78367 333 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 HECTD3Q5T447 861 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 USP43Q70EL4 1123 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 C11orf96Q7Z7L8 435 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 MFSD4AQ8N468 514 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 SLC5A8Q8N695 610 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 C2orf69Q8N8R5 385 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 MTERF3Q96E29 417 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 ZNF486Q96H40 463 aaPredicted RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 CNDP2Q96KP4 475 aaKnown RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 CRISPLD1Q9H336 500 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 PAQR5Q9NXK6 330 aaPredicted RBP12.33□□□□□ -0.44
VPS52-218ENST00000482399 PCDHB8Q9UN66 801 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 RLFQ13129 1914 aa12.33□□□□□ -0.44
VPS52-218ENST00000482399 AGAP5A6NIR3 686 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 CLDN11O75508 207 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ZNF865P0CJ78 1059 aaPredicted RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 ATXN8OSP0DMR3 200 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 LAMP1P11279 417 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 SDC1P18827 310 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PCMT1P22061 227 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 CRISP3P54108 245 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 NAE1Q13564 534 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 SYTL3Q4VX76 610 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 DGKKQ5KSL6 1271 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 IRAK1BP1Q5VVH5 260 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 AFMIDQ63HM1 303 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 TEX26Q8N6G2 289 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 OR4A15Q8NGL6 344 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PKP4Q99569 1192 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ACAT2Q9BWD1 397 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 TRPM5Q9NZQ8 1165 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 TEKT2Q9UIF3 430 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 M0QX08 132 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ACPPP15309 386 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 XPAP23025 273 aaPredicted RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 CLCN7P51798 805 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PDZK1Q5T2W1 519 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 CPTPQ5TA50 214 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ATG9BQ674R7 924 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 NOXRED1Q6NXP6 359 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 FAM131AQ6UXB0 335 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 DOCK3Q8IZD9 2030 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 OR9Q1Q8NGQ5 310 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 GFM1Q96RP9 751 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 MGME1Q9BQP7 344 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 MMP28Q9H239 520 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 KCNH6Q9H252 994 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 MMP27Q9H306 513 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 THG1LQ9NWX6 298 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 PCDHB1Q9Y5F3 818 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 SAGE2PA6NJ88 616 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 AP3D1O14617 1153 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PRRG1O14668 218 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 DYRK3O43781 588 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 AP2A2O94973 939 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 PTHP01270 115 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 CKMP06732 381 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 RETP07949 1114 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ANXA4P09525 319 aaPredicted RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 SSTR4P31391 388 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 RYKP34925 604 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 EIF2DP41214 584 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 CDH4P55283 916 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 BCL7AQ4VC05 210 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 RFLNAQ6ZTI6 216 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ZNF467Q7Z7K2 595 aaPredicted RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 FOXJ1Q92949 421 aa12.32□□□□□ -0.44
VPS52-218ENST00000482399 ISG20Q96AZ6 181 aaKnown RBP12.32□□□□□ -0.44
VPS52-218ENST00000482399 TMEM246Q9BRR3 403 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 128 ms