RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 NKAPQ8N5F7 415 aaKnown RBP11.34□□□□□ -0.59
HMGN1-213ENST00000482192 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-213ENST00000482192 ATL1Q8WXF7 558 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 ANKRD7Q92527 254 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 COL26A1Q96A83 441 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 MVB12AQ96EY5 273 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 VPS39Q96JC1 886 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 FER1L6-AS2Q96M78 137 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 PRAP1Q96NZ9 151 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 MCMBPQ9BTE3 642 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 SLC25A23Q9BV35 468 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 SGPP1Q9BX95 441 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 ATG10Q9H0Y0 220 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 POPDC3Q9HBV1 291 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 ZNF304Q9HCX3 659 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 TMEM184CQ9NVA4 438 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CUEDC1Q9NWM3 386 aaPredicted RBP11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CTSFQ9UBX1 484 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 CDC14AQ9UNH5 594 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 RUVBL1Q9Y265 456 aaKnown RBP11.34□□□□□ -0.59
HMGN1-213ENST00000482192 MAU2Q9Y6X3 613 aa11.34□□□□□ -0.59
HMGN1-213ENST00000482192 KCNE1BA0A087WTH5 132 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 K7EM74 188 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 HAT1O14929 419 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 PRPF4O43172 522 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 URI1O94763 535 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 MED26O95402 600 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 NR1D1P20393 614 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 MMP11P24347 488 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 CASRP41180 1078 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 SLC12A2P55011 1212 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 FOXL2P58012 376 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 TAS2R39P59534 338 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 RPS15AP62244 130 aaKnown RBP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 NAE1Q13564 534 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 WHAMMP3Q1A5X7 153 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 HKDC1Q2TB90 917 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 GARNL3Q5VVW2 1013 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 C8orf74Q6P047 294 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 LCTLQ6UWM7 567 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 SBSNQ6UWP8 590 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 TMEM207Q6UWW9 146 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 ZDHHC24Q6UX98 284 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 C3orf62Q6ZUJ4 267 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 PPP1R32Q7Z5V6 425 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 C17orf64Q86WR6 236 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 CLEC1AQ8NC01 280 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 FBXO25Q8TCJ0 367 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 ALKBH8Q96BT7 664 aaKnown RBP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 FBXL8Q96CD0 374 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 SPSB2Q99619 263 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 HAUS8Q9BT25 410 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 SYNPO2LQ9H987 977 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 GPAMQ9HCL2 828 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 MLXIPLQ9NP71 852 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 SMYD2Q9NRG4 433 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 P4HTMQ9NXG6 502 aa11.33□□□□□ -0.6
HMGN1-213ENST00000482192 ZNF282Q9UDV7 671 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 NOVA2Q9UNW9 492 aaKnown RBP11.33□□□□□ -0.6
HMGN1-213ENST00000482192 FAM159BA6NKW6 160 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 VSTM2BA6NLU5 285 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 AGPSO00116 658 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 PIAS1O75925 651 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 GUCA1CO95843 209 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 PDGFAP04085 211 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 NPPBP16860 134 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 FBLP22087 321 aaKnown RBP11.32□□□□□ -0.6
HMGN1-213ENST00000482192 GRK3P35626 688 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 POU4F1Q01851 419 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 OCA2Q04671 838 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 TLE1Q04724 770 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 DSG2Q14126 1118 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 ZNF460Q14592 562 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 PPP1R3AQ16821 1122 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 DCAF10Q5QP82 559 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 CCDC25Q86WR0 208 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 HPS6Q86YV9 775 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 PLD3Q8IV08 490 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 CEP97Q8IW35 865 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 TEX19Q8NA77 164 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 FDCSPQ8NFU4 85 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 OR56A3Q8NH54 315 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 ZNF592Q92610 1267 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 THAP11Q96EK4 314 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 TSPAN17Q96FV3 270 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 RBBP8Q99708 897 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 CPNE1Q99829 537 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 FAM129AQ9BZQ8 928 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 TRIM4Q9C037 500 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 DRC3Q9H069 523 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 EPN3Q9H201 632 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 SOX17Q9H6I2 414 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-213ENST00000482192 SEMA3GQ9NS98 782 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 GPR83Q9NYM4 423 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 PCDHGB7Q9Y5F8 929 aa11.32□□□□□ -0.6
HMGN1-213ENST00000482192 KALRNO60229 2985 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms