RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 RTP4Q96DX8 246 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 IMP4Q96G21 291 aaKnown RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 HSH2DQ96JZ2 352 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RDH12Q96NR8 316 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RANBP9Q96S59 729 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 XKR8Q9H6D3 395 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PLXNA1Q9UIW2 1896 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CLEC4EQ9ULY5 219 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 GIT1Q9Y2X7 761 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 WNT6Q9Y6F9 365 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ZFC3H1O60293 1989 aaKnown RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PRSS51A0A1B0GVH4 220 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 MTMR11A4FU01 709 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SLC38A8A6NNN8 435 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TNFRSF11BO00300 401 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TEX28O15482 410 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SUV39H1O43463 412 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SGTAO43765 313 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RFC2P35250 354 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PXNP49023 591 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF135P52742 658 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CREMQ03060 361 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 NFATC3Q12968 1075 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 BNIP2Q12982 314 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 IHHQ14623 411 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 GRIN2CQ14957 1233 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SETMARQ53H47 684 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TTC23LQ6PF05 361 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 LARP4Q71RC2 724 aaKnown RBP eCLIP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ADAMTSL2Q86TH1 951 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ARMC8Q8IUR7 673 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 BBS10Q8TAM1 723 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 HMGCLL1Q8TB92 370 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RTP3Q9BQQ7 232 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 DCSTAMPQ9H295 470 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 MFSD1Q9H3U5 465 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 DYRK4Q9NR20 520 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 AASDHPPTQ9NRN7 309 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SLC6A13Q9NSD5 602 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SAGE1Q9NXZ1 904 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ACTR3BQ9P1U1 418 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PCDHB14Q9Y5E9 798 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ZNF318Q5VUA4 2279 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CFAP47Q6ZTR5 3102 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CCDC88CQ9P219 2028 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 KLHL33A6NCF5 533 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CLDN25C9JDP6 229 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RGS10O43665 173 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 KERAO60938 352 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CLDN9O95484 217 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 ETFAP13804 333 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SERPINA4P29622 427 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 MAPK9P45984 424 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CCR4P51679 360 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 HK3P52790 923 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 IL18R1Q13478 541 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SERINC3Q13530 473 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 GRM2Q14416 872 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 DSC3Q14574 896 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TAZQ16635 292 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 FAM187BQ17R55 369 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PYDC2Q56P42 97 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SLC35F1Q5T1Q4 408 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 EIF3MQ7L2H7 374 aaKnown RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 IGFN1Q86VF2 1251 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 BBS7Q8IWZ6 715 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 MMP21Q8N119 569 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CHST14Q8NCH0 376 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 PROKR1Q8TCW9 393 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 DEPDC7Q96QD5 511 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TRIM62Q9BVG3 475 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 NPLQ9BXD5 320 aaPredicted RBP4.84□□□□□ -1.63
CCDC39-204ENST00000476379 VN1R3Q9BXE9 311 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 RBCK1Q9BYM8 510 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 OR2AG1Q9H205 316 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SYNDIG1Q9H7V2 258 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SIAEQ9HAT2 523 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 FBXW2Q9UKT8 454 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 FZD4Q9ULV1 537 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SPATA2Q9UM82 520 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 TPRKBQ9Y3C4 175 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 CLCA3PQ9Y6N3 262 aa4.84□□□□□ -1.63
CCDC39-204ENST00000476379 SDK2Q58EX2 2172 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 ZNF860A6NHJ4 632 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 UNCXA6NJT0 531 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 PCP4L1A6NKN8 68 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 LRRTM2O43300 516 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 BCAS1O75363 584 aaPredicted RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 FUCA1P04066 466 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 KLK1P06870 262 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 RAP2AP10114 183 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 LAMP1P11279 417 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 IMPDH2P12268 514 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 BCKDHAP12694 445 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 LEPRP48357 1165 aaKnown RBP4.84□□□□□ -1.64
CCDC39-204ENST00000476379 CSNK1DP48730 415 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 ST8SIA6P61647 398 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 MGAT3Q09327 533 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 ZBTB6Q15916 424 aa4.84□□□□□ -1.64
CCDC39-204ENST00000476379 NNATQ16517 81 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms