RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 HIST1H2AHQ96KK5 128 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 C10orf90Q96M02 699 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 OR2A5Q96R48 311 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 SPSB2Q99619 263 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 HIST1H2AJQ99878 128 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 H2AFJQ9BTM1 129 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 PCBD2Q9H0N5 130 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 SYNPO2LQ9H987 977 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 ZNF304Q9HCX3 659 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 NSMCE4AQ9NXX6 385 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 CTSFQ9UBX1 484 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 PCDHGB7Q9Y5F8 929 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 MAU2Q9Y6X3 613 aa21.51■■□□□ 1.03
PTP4A1-203ENST00000473334 PABPN1LA6NDY0 278 aaKnown RBP21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 EIF3HO15372 352 aaKnown RBP eCLIP21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 HRH2P25021 359 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 DUPD1Q68J44 220 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 ZC3HC1Q86WB0 502 aaKnown RBP21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 TMEM151BQ8IW70 566 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 FDCSPQ8NFU4 85 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 PYROXD1Q8WU10 500 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 NACC2Q96BF6 587 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 ATG10Q9H0Y0 220 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 TMEM184CQ9NVA4 438 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 P4HTMQ9NXG6 502 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 GRHL1Q9NZI5 618 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 RUVBL1Q9Y265 456 aaKnown RBP21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 UTP11Q9Y3A2 253 aaKnown RBP21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 ZNF451Q9Y4E5 1061 aa21.5■■□□□ 1.03
PTP4A1-203ENST00000473334 H7BY64 318 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 TXNDC9O14530 226 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 MMP11P24347 488 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 CCND1P24385 295 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 CSRP3P50461 194 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 HKDC1Q2TB90 917 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 COLEC12Q5KU26 742 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 DCAF10Q5QP82 559 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 CAPN12Q6ZSI9 719 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 CLEC1AQ8NC01 280 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 COL26A1Q96A83 441 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 MVB12AQ96EY5 273 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 PDLIM5Q96HC4 596 aaKnown RBP21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 PRAP1Q96NZ9 151 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 NUDT9Q9BW91 350 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 TRIM54Q9BYV2 358 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 SOX17Q9H6I2 414 aaPredicted RBP21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 SAYSD1Q9NPB0 183 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 GPR83Q9NYM4 423 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 CDC14AQ9UNH5 594 aa21.49■■□□□ 1.03
PTP4A1-203ENST00000473334 FAM95CA0A1B0GW59 222 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 A6NL46 340 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 VSTM2BA6NLU5 285 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 ZNF37AP17032 561 aaPredicted RBP21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 SAT1P21673 171 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 AP1S2P56377 157 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 NAE1Q13564 534 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 GARNL3Q5VVW2 1013 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 ZNF572Q7Z3I7 529 aaPredicted RBP21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 C17orf64Q86WR6 236 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 PLD3Q8IV08 490 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 SGPP1Q9BX95 441 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 RAB17Q9H0T7 212 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 ARL15Q9NXU5 204 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 CDC23Q9UJX2 597 aa21.48■■□□□ 1.03
PTP4A1-203ENST00000473334 AGPSO00116 658 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 PRPF4O43172 522 aaKnown RBP eCLIP21.47■■□□□ 1.034e-10■□□□□ 11.1
PTP4A1-203ENST00000473334 ENO2P09104 434 aaPredicted RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 FBLP22087 321 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 SSTR1P30872 391 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 RPS15AP62244 130 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 KCNC4Q03721 635 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 OCA2Q04671 838 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 ILF2Q12905 390 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 LCTLQ6UWM7 567 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 TMEM207Q6UWW9 146 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 SHISA6Q6ZSJ9 500 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 NKAPQ8N5F7 415 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 ALKBH8Q96BT7 664 aaKnown RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 RHOJQ9H4E5 214 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 CLMPQ9H6B4 373 aa21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 ZNF282Q9UDV7 671 aaPredicted RBP21.47■■□□□ 1.03
PTP4A1-203ENST00000473334 P2RX6O15547 441 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 TAS2R39P59534 338 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 CSNK1G2P78368 415 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 CAV1Q03135 178 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 CAPN13Q6MZZ7 669 aaPredicted RBP21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 HPS6Q86YV9 775 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 ARHGEF39Q8N4T4 335 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 STT3BQ8TCJ2 826 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 ATL1Q8WXF7 558 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 CDKL2Q92772 493 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 MIEF2Q96C03 454 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 FBXL8Q96CD0 374 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 SMAD5Q99717 465 aaKnown RBP21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 HAUS8Q9BT25 410 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 MCMBPQ9BTE3 642 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 PHACTR1Q9C0D0 580 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 SMYD2Q9NRG4 433 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 SEMA3GQ9NS98 782 aa21.46■■□□□ 1.03
PTP4A1-203ENST00000473334 NOVA2Q9UNW9 492 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms