RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 OCA2Q04671 838 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CDK5R2Q13319 367 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 PPIGQ13427 754 aaKnown RBP eCLIP12.05□□□□□ -0.48
LINC00959-201ENST00000456581 OXA1LQ15070 435 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 SERPINA13PQ6UXR4 307 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 TMC5Q6UXY8 1006 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 B3GNT8Q7Z7M8 397 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 C12orf40Q86WS4 652 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 RBFAQ8N0V3 343 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 ECHDC3Q96DC8 303 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 NRBF2Q96F24 287 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 MARCH7Q9H992 704 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 WDR70Q9NW82 654 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 GNPTGQ9UJJ9 305 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CAB39Q9Y376 341 aaPredicted RBP12.05□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF451Q9Y4E5 1061 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 ANGPTL3Q9Y5C1 460 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 PLXNB3Q9ULL4 1909 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 NADKO95544 446 aaPredicted RBP12.05□□□□□ -0.48
LINC00959-201ENST00000456581 JAK1P23458 1154 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CSNK1DP48730 415 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 GRIK2Q13002 908 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 GBX1Q14549 363 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF77Q15935 545 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 RBM48Q5RL73 367 aaKnown RBP12.05□□□□□ -0.48
LINC00959-201ENST00000456581 TTC23Q5W5X9 447 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 NIPAL1Q6NVV3 410 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CERS6Q6ZMG9 384 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 TPRG1Q6ZUI0 275 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 HTRA1Q92743 480 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 UGT2B28Q9BY64 529 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 WWOXQ9NZC7 414 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 CCDC88CQ9P219 2028 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 SLC25A13Q9UJS0 675 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 SNX5Q9Y5X3 404 aa12.05□□□□□ -0.48
LINC00959-201ENST00000456581 TRBV5-4A0A0C4DH59 114 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ARNTLO00327 626 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 LEFTY1O75610 366 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 OXSR1O95747 527 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ANGPTL1O95841 491 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 LCKP06239 509 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 CTSLP07711 333 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 SEPHS1P49903 392 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 EPHA5P54756 1037 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ARHGEF7Q14155 803 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ARSIQ5FYB1 569 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF691Q5VV52 312 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 BEND7Q8N7W2 519 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ARL10Q8N8L6 244 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 TERB1Q8NA31 727 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 MAGED4Q96JG8 741 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 EBPLQ9BY08 206 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 YTHDF1Q9BYJ9 559 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 KAT8Q9H7Z6 458 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 TCF20Q9UGU0 1960 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 OTOL1A6NHN0 477 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 BCKDHAP12694 445 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 SPNP16150 400 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 AKT1P31749 480 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 TMED10P49755 219 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 CLK3P49761 638 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 INAQ16352 499 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 SYT16Q17RD7 645 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ZXDCQ2QGD7 858 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 PRSS36Q5K4E3 855 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 C6orf183Q5T699 404 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 GPRC6AQ5T6X5 926 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 Q6ZVL8 140 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 HSD11B1LQ7Z5J1 315 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 VRK3Q8IV63 474 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 MICU2Q8IYU8 434 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 MFSD4AQ8N468 514 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 OR8J3Q8NGG0 315 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 CDC26Q8NHZ8 85 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 SP7Q8TDD2 431 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF707Q96C28 371 aaPredicted RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 RBM4BQ9BQ04 359 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 RBM4Q9BWF3 364 aaKnown RBP12.04□□□□□ -0.48
LINC00959-201ENST00000456581 MCOLN1Q9GZU1 580 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 GORASP2Q9H8Y8 452 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 AKIP1Q9NQ31 210 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 NUDT4Q9NZJ9 180 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ITM2BQ9Y287 266 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 PCDHB1Q9Y5F3 818 aa12.04□□□□□ -0.48
LINC00959-201ENST00000456581 ZNF99A8MXY4 864 aaPredicted RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 CLDN25C9JDP6 229 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 UGT2B11O75310 529 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ULK1O75385 1050 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 POP4O95707 220 aaKnown RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 MT-ND2P03891 347 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 CCR7P32248 378 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 HSPA14Q0VDF9 509 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 USP45Q70EL2 814 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 EFL1Q7Z2Z2 1120 aaKnown RBP12.03□□□□□ -0.48
LINC00959-201ENST00000456581 EID3Q8N140 333 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 ZBTB2Q8N680 514 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 LEMD2Q8NC56 503 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 PJA1Q8NG27 643 aa12.03□□□□□ -0.48
LINC00959-201ENST00000456581 OR7A2PQ8NGA2 310 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms