RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 SAGE2PA6NJ88 616 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 CBX4O00257 560 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 TSC22D2O75157 780 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 SEMA3DO95025 777 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 NPPAP01160 153 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RPLP0P05388 317 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ITGAMP11215 1152 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RRM2P31350 389 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RPS24P62847 133 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 MGAT3Q09327 533 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RFX4Q33E94 735 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 USP39Q53GS9 565 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ARMC12Q5T9G4 340 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 PTRHD1Q6GMV3 140 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 NADSYN1Q6IA69 706 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ABI3BPQ7Z7G0 1075 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 GTPBP3Q969Y2 492 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ST6GAL2Q96JF0 529 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 FEVQ99581 238 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 SNTG1Q9NSN8 517 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 TMEM39AQ9NV64 488 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 TMEM248Q9NWD8 314 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RGS14O43566 566 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 SOX3P41225 446 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ZNF157P51786 506 aaPredicted RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 CTXN3Q4LDR2 81 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 ERAP2Q6P179 960 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 MRPL10Q7Z7H8 261 aaKnown RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 LACC1Q8IV20 430 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 GLB1L3Q8NCI6 653 aaPredicted RBP13.08□□□□□ -0.32
LRCH3-203ENST00000425562 PPP3R2Q96LZ3 170 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 PANX1Q96RD7 426 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 OR2B2Q9GZK3 357 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 RHCGQ9UBD6 479 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 MALT1Q9UDY8 824 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 PPT2Q9UMR5 302 aa13.08□□□□□ -0.32
LRCH3-203ENST00000425562 FNDC1Q4ZHG4 1894 aaPredicted RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ERVH48-1M5A8F1 160 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 RFXAPO00287 272 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TAPBPO15533 448 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 OTCP00480 354 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ALPIP09923 528 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ADORA3P0DMS8 318 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ENGP17813 658 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 HLA-DPA1P20036 260 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 OGNP20774 298 aaKnown RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TNFSF8P32971 234 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 HTR2BP41595 481 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 RAB25P57735 213 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 SERINC3Q13530 473 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 KCNA10Q16322 511 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TYSND1Q2T9J0 566 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 C16orf59Q7L2K0 433 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 RTN4RL1Q86UN2 441 aaPredicted RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 LAX1Q8IWV1 398 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 SLC38A6Q8IZM9 456 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ZNF566Q969W8 418 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 CPPED1Q9BRF8 314 aaPredicted RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 CCM2Q9BSQ5 444 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TRIM62Q9BVG3 475 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 CLDN24A6NM45 220 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 C2orf81A6NN90 581 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 LRRTM2O43300 516 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 DNAJB5O75953 348 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 IRF1P10914 325 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 DNAJA1P31689 397 aaKnown RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ZNF140P52738 457 aaPredicted RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 HOXC5Q00444 222 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ZNF544Q6NX49 715 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 AFTPHQ6ULP2 937 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 SBSNQ6UWP8 590 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ZNF438Q7Z4V0 828 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TSPYL5Q86VY4 417 aaPredicted RBP13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TMEM132CQ8N3T6 1108 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 C7orf57Q8NEG2 295 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 TMEM203Q969S6 136 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 ABCB9Q9NP78 766 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 SERHLQ9NQF3 203 aa13.07□□□□□ -0.32
LRCH3-203ENST00000425562 FAM172BPA6NC97 362 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 FAM227AF5H4B4 570 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 ICMTO60725 284 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 DUSP11O75319 330 aaKnown RBP13.06□□□□□ -0.32
LRCH3-203ENST00000425562 RETP07949 1114 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 FEN1P39748 380 aaKnown RBP13.06□□□□□ -0.32
LRCH3-203ENST00000425562 CDK10Q15131 360 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 SYCE2Q6PIF2 218 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 CAMKK1Q8N5S9 505 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 CHAC2Q8WUX2 184 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 PDLIM5Q96HC4 596 aaKnown RBP13.06□□□□□ -0.32
LRCH3-203ENST00000425562 PPP1R2P1Q96PQ5 205 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 SH3GL1Q99961 368 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 IL1RAPQ9NPH3 570 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 MS4A12Q9NXJ0 267 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 SCML2Q9UQR0 700 aa13.06□□□□□ -0.32
LRCH3-203ENST00000425562 CCL27Q9Y4X3 112 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms