RNA–Protein interactions for RNA: ENST00000397942.3

SOCS6-201, Transcript of suppressor of cytokine signaling 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOCS6, Length 5,848 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS6-201ENST00000397942 UPK3BL1B0FP48 263 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 UPK3BL2E5RIL1 263 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 H0YJX3 145 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 HLA-DQA2P01906 255 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 GABRB3P28472 473 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 TAS2R50P59544 299 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 SCARB2Q14108 478 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 ATP6AP1Q15904 470 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 GALNT13Q8IUC8 556 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 KRTCAP2Q8N6L1 136 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 OR8J3Q8NGG0 315 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 IGSF21Q96ID5 467 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 CXCL16Q9H2A7 254 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 TRIT1Q9H3H1 467 aaKnown RBP12.08□□□□□ -0.47
SOCS6-201ENST00000397942 UBAP1Q9NZ09 502 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 PCDHB3Q9Y5E6 796 aa12.08□□□□□ -0.47
SOCS6-201ENST00000397942 PDPK1O15530 556 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 C9P02748 559 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 TUBA3CQ13748 450 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ABRAXAS2Q15018 415 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 COLEC12Q5KU26 742 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 NANOGNBQ7Z5D8 188 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 POMGNT2Q8NAT1 580 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PRICKLE1Q96MT3 831 aaPredicted RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ERVW-1Q9UQF0 538 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CFAP20Q9Y6A4 193 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 HIST1H2ABP04908 130 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PRKAR1AP10644 381 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ELK4P28324 431 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 STAT5AP42229 794 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CLCNKAP51800 687 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PRAMEF14Q5SWL7 426 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PRAMEF13Q5VWM6 474 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 LCN8Q6JVE9 175 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 SUSD1Q6UWL2 747 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CEACAM20Q6UY09 585 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 HIST3H2AQ7L7L0 130 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 DNASE1L2Q92874 299 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 HIST1H2ACQ93077 130 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 TTLL2Q9BWV7 592 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 TBC1D17Q9HA65 648 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PCDHGA7Q9Y5G6 932 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 SPTAN1Q13813 2472 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 H0YAE9 185 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CBSLP0DN79 551 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ACP5P13686 325 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CBSP35520 551 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 MYBPC3Q14896 1274 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 SPIN4Q56A73 249 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 FAM171BQ6P995 826 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 C9orf43Q8TAL5 461 aaPredicted RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 HDAC2Q92769 488 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 MRPL39Q9NYK5 338 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 SPIN1Q9Y657 262 aaPredicted RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 FGF19O95750 216 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 VIPP01282 170 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PRDX3P30048 256 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 HNF1BP35680 557 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 CRISP3P54108 245 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ERVPABLB-1P60509 514 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 LGALS3BPQ08380 585 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 KIAA1614Q5VZ46 1190 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 MBOAT1Q6ZNC8 495 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 MMAAQ8IVH4 418 aaKnown RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 ZNF641Q96N77 438 aaPredicted RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 KCNH6Q9H252 994 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 PCTPQ9UKL6 214 aa12.08□□□□□ -0.48
SOCS6-201ENST00000397942 GPC6Q9Y625 555 aaPredicted RBP12.08□□□□□ -0.48
SOCS6-201ENST00000397942 TFAP2AP05549 437 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 TYRP14679 529 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 ZNF30P17039 623 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 FOXA1P55317 472 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 DSTNP60981 165 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 COQ5Q5HYK3 327 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 TRIM74Q86UV6 250 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 NUDT13Q86X67 352 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 MZB1Q8WU39 189 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 SMPDL3AQ92484 453 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 TMEM203Q969S6 136 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 CMTM7Q96FZ5 175 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 SLC35G5Q96KT7 338 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 OR51V1Q9H2C8 321 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 CLEC4AQ9UMR7 237 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 PRKAB1Q9Y478 270 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 HMX2A2RU54 273 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 SLC35G6P0C7Q6 338 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 RPL10P27635 214 aaKnown RBP12.07□□□□□ -0.48
SOCS6-201ENST00000397942 CSTF2P33240 577 aaKnown RBP eCLIP12.07□□□□□ -0.48
SOCS6-201ENST00000397942 CDKN1CP49918 316 aaPredicted RBP12.07□□□□□ -0.48
SOCS6-201ENST00000397942 ILF3Q12906 894 aaKnown RBP eCLIP12.07□□□□□ -0.48
SOCS6-201ENST00000397942 C5orf22Q49AR2 442 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 PAGE3Q5JUK9 113 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 ANKRD26P1Q6NSI1 321 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 UGT2A3Q6UWM9 527 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 GEMIN6Q8WXD5 167 aaKnown RBP12.07□□□□□ -0.48
SOCS6-201ENST00000397942 YIPF4Q9BSR8 244 aa12.07□□□□□ -0.48
SOCS6-201ENST00000397942 TMEM27Q9HBJ8 222 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms