RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 NACC2Q96BF6 587 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 HTATIP2Q9BUP3 242 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 SMG9Q9H0W8 520 aaKnown RBP15.66■□□□□ 0.1
PCDH1-203ENST00000394536 GORASP2Q9H8Y8 452 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 C14orf119Q9NWQ9 140 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 ZDHHC3Q9NYG2 299 aa15.66■□□□□ 0.1
PCDH1-203ENST00000394536 A8MV72 311 aaPredicted RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 RPLP0P05388 317 aaKnown RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 CDKN2CP42773 168 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 PREPP48147 710 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 SLC16A1P53985 500 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 CLDN8P56748 225 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TCEA2Q15560 299 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 GPR33Q49SQ1 333 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 AFMIDQ63HM1 303 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 RAVER1Q8IY67 606 aaKnown RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 RNF38Q9H0F5 515 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TRIM39Q9HCM9 518 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 GIMAP4Q9NUV9 329 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 KIAA1522Q9P206 1035 aaPredicted RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 RUVBL1Q9Y265 456 aaKnown RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ZFC3H1O60293 1989 aaKnown RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 SEC14L2O76054 403 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 LAMP1P11279 417 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 IFNA8P32881 189 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TNFAIP8L2Q6P589 184 aaPredicted RBP15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TRIM40Q6P9F5 258 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 NCEH1Q6PIU2 408 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 CEP68Q76N32 757 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ZZZ3Q8IYH5 903 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TMEM203Q969S6 136 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 RHNO1Q9BSD3 238 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 DYRK4Q9NR20 520 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TLR9Q9NR96 1032 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 SNTG1Q9NSN8 517 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ADAMDEC1O15204 470 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 C9P02748 559 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 DNTTP04053 509 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 TGFBR1P36897 503 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ARF5P84085 180 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 NKG7Q16617 165 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 HOMEZQ8IX15 550 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 NLNQ9BYT8 704 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ELOVL2Q9NXB9 296 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 SPG21Q9NZD8 308 aa15.65■□□□□ 0.1
PCDH1-203ENST00000394536 ARHGEF9O43307 516 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SOX14O95416 240 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CLCN7P51798 805 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ST3GAL4Q11206 333 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 COL9A2Q14055 689 aaPredicted RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 GPRC6AQ5T6X5 926 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 Q6ZVL8 140 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 Q6ZVU0 165 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SLC7A5P1Q8MH63 180 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 Q96MT0 163 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SUV39H2Q9H5I1 410 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ZBTB20Q9HC78 741 aaPredicted RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 TSC22D2O75157 780 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 GALTP07902 379 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SDC1P18827 310 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SUOXP51687 545 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 MEF2AQ02078 507 aaPredicted RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CREMQ03060 361 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ANXA8L1Q5VT79 327 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 TMEM179BQ7Z7N9 219 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ANKRD13BQ86YJ7 626 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CFAP206Q8IYR0 622 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 TRPV1Q8NER1 839 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CHPT1Q8WUD6 406 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ATL1Q8WXF7 558 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 OR51B5Q9H339 312 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 GPR83Q9NYM4 423 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 WBP11Q9Y2W2 641 aaKnown RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 FAM92AA1XBS5 289 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 SNX4O95219 450 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ACRV1P26436 265 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CD300CQ08708 224 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CARD16Q5EG05 197 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 ZC3H12BQ5HYM0 836 aaKnown RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 RFLNAQ6ZTI6 216 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 B3GNT8Q7Z7M8 397 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 IFNL1Q8IU54 200 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 OR2AP1Q8NGE2 309 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 STARD8Q92502 1023 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 WRAP53Q9BUR4 548 aaKnown RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 DSN1Q9H410 356 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 OSGEPL1Q9H4B0 414 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 GPN2Q9H9Y4 310 aaPredicted RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 CARS2Q9HA77 564 aaKnown RBP15.64■□□□□ 0.09
PCDH1-203ENST00000394536 KLHL20Q9Y2M5 609 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 YIPF1Q9Y548 306 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 FER1L6Q2WGJ9 1857 aa15.64■□□□□ 0.09
PCDH1-203ENST00000394536 IGLV3-10A0A075B6K4 115 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 WNT9AO14904 365 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 GADD45GO95257 159 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 NUDT7P0C024 238 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 SELPP16109 830 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 GADD45AP24522 165 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 NCF4Q15080 339 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 IFI44LQ53G44 452 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms