RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 PCDHB8Q9UN66 801 aa17.23■□□□□ 0.35
VPS26A-202ENST00000373382 BTBD3Q9Y2F9 522 aa17.23■□□□□ 0.35
VPS26A-202ENST00000373382 TRBV5-3A0A0A0MS03 114 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 ANKRD34BA5PLL1 514 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 CLDN8P56748 225 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 TUBA1BP68363 451 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 SMARCB1Q12824 385 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 GLB1LQ6UWU2 654 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 TUBA1AQ71U36 451 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 ZBTB2Q8N680 514 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 FBLIM1Q8WUP2 373 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 IPCEF1Q8WWN9 437 aaPredicted RBP17.22■□□□□ 0.35
VPS26A-202ENST00000373382 FATE1Q969F0 183 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 GTPBP3Q969Y2 492 aaKnown RBP17.22■□□□□ 0.35
VPS26A-202ENST00000373382 TMEM184CQ9NVA4 438 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 RIMKLBQ9ULI2 386 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 DUSP12Q9UNI6 340 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 WBP11Q9Y2W2 641 aaKnown RBP17.22■□□□□ 0.35
VPS26A-202ENST00000373382 N6AMT1Q9Y5N5 214 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 MICAL3Q7RTP6 2002 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 OTOFQ9HC10 1997 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 GFRA2O00451 464 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 KMOO15229 486 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 CLDN7O95471 211 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 GZMMP51124 257 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 CDC20Q12834 499 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 CYP4Z2PQ8N1L4 340 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 NELL1Q92832 810 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 MS4A4AQ96JQ5 239 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 DEPDC7Q96QD5 511 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 CDK5RAP1Q96SZ6 601 aaKnown RBP17.22■□□□□ 0.35
VPS26A-202ENST00000373382 PRRG3Q9BZD7 231 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 TMEM45AQ9NWC5 275 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 IL17CQ9P0M4 197 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 SLC6A14Q9UN76 642 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 TMEM98Q9Y2Y6 226 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 OARD1Q9Y530 152 aa17.22■□□□□ 0.35
VPS26A-202ENST00000373382 MAGEB17A8MXT2 336 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 SLC11A2P49281 568 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 CDH12P55289 794 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 MAP2K5Q13163 448 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 TSTA3Q13630 321 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-202ENST00000373382 KBTBD8Q8NFY9 601 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 MYDGFQ969H8 173 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 SH3KBP1Q96B97 665 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 P2RY12Q9H244 342 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.21■□□□□ 0.35
VPS26A-202ENST00000373382 TNFRSF11BO00300 401 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 HAT1O14929 419 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 KIAA0513O60268 411 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 KCNK5O95279 499 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 EBLN1P0CF75 366 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 TYMPP19971 482 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 TSTQ16762 297 aaKnown RBP17.21■□□□□ 0.35
VPS26A-202ENST00000373382 ARMC4Q5T2S8 1044 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 PNCKQ6P2M8 343 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 NRARPQ7Z6K4 114 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 SLC5A8Q8N695 610 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 TRIM39Q9HCM9 518 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 DICER1Q9UPY3 1922 aaKnown RBP17.21■□□□□ 0.35
VPS26A-202ENST00000373382 DOCK4Q8N1I0 1966 aa17.21■□□□□ 0.35
VPS26A-202ENST00000373382 SMIM30A4D0T7 59 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 ANXA5P08758 320 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 ACPPP15309 386 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.34
VPS26A-202ENST00000373382 MXD1Q05195 221 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 BOP1Q14137 746 aaKnown RBP17.21■□□□□ 0.34
VPS26A-202ENST00000373382 NDUFA5Q16718 116 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 LACC1Q8IV20 430 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 OR5M11Q96RB7 305 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 CNPPD1Q9BV87 410 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 OLA1Q9NTK5 396 aaKnown RBP17.21■□□□□ 0.34
VPS26A-202ENST00000373382 SPASTQ9UBP0 616 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 SLC22A14Q9Y267 594 aa17.21■□□□□ 0.34
VPS26A-202ENST00000373382 H3BM21 787 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 TPD52L2O43399 206 aaKnown RBP17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SUV39H1O43463 412 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 KDELR3O43731 214 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 PTTG1O95997 202 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 C9P02748 559 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SLC10A3P09131 477 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SOX6P35712 828 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SLC15A1P46059 708 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 ZFP69Q49AA0 526 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 MFSD4BQ5TF39 518 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 LINC00299Q6ZSB3 139 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 BEND7Q8N7W2 519 aaPredicted RBP17.2■□□□□ 0.34
VPS26A-202ENST00000373382 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 COPS8Q99627 209 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SH3BP4Q9P0V3 963 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 LAMA2P24043 3122 aaKnown RBP17.2■□□□□ 0.34
VPS26A-202ENST00000373382 CR2P20023 1033 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 ITGALP20701 1170 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 MAGEA2P43356 314 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 SPIBQ01892 262 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 FADDQ13158 208 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 ATAD3CQ5T2N8 411 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 TRIM46Q7Z4K8 759 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 ZZZ3Q8IYH5 903 aa17.2■□□□□ 0.34
VPS26A-202ENST00000373382 RBFAQ8N0V3 343 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms