RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 RAB30Q15771 203 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 DUOXA1Q1HG43 343 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 C10orf62Q5T681 223 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ADNP2Q6IQ32 1131 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 PNCKQ6P2M8 343 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ISLR2Q6UXK2 745 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 UNC5DQ6UXZ4 953 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 LRRC56Q8IYG6 542 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 CHTF18Q8WVB6 975 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 PRPF18Q99633 342 aaKnown RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ZDHHC5Q9C0B5 715 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 OR52A5Q9H2C5 316 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 EHD1Q9H4M9 534 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 LIMD1Q9UGP4 676 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 PADI4Q9UM07 663 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 DYRK1BQ9Y463 629 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 STON1Q9Y6Q2 735 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 EI24O14681 340 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 SCN2BO60939 215 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 DEAF1O75398 565 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 APODP05090 189 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 RETP07949 1114 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 SOX9P48436 509 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 RAE1P78406 368 aaKnown RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ABHD18Q0P651 414 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 MERTKQ12866 999 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 RPA4Q13156 261 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ENPP2Q13822 863 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 STARD3Q14849 445 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 SPIN4Q56A73 249 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 KRT80Q6KB66 452 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 FAM83HQ6ZRV2 1179 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 EP400NLQ6ZTU2 488 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 NUDT18Q6ZVK8 323 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 HEATR4Q86WZ0 1026 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 C1orf52Q8N6N3 182 aaKnown RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 FAM162AQ96A26 154 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 VPS50Q96JG6 964 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 EFCAB11Q9BUY7 163 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 ADI1Q9BV57 179 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 FAM120CQ9NX05 1096 aaKnown RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 PRKAB1Q9Y478 270 aa19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 PCYT1BQ9Y5K3 369 aaPredicted RBP19.66■□□□□ 0.74
CHRNA3-202ENST00000348639 IGLON5A6NGN9 336 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 MID1O15344 667 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 PGM3O95394 542 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 COX7A2P14406 83 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 ASMTP46597 345 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 RPL5P46777 297 aaKnown RBP19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 WNT3P56703 355 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 CATSPEREQ5SY80 951 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 C10orf111Q8N326 155 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 POP5Q969H6 163 aaKnown RBP19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 REXO5Q96IC2 774 aaKnown RBP19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 RSPH9Q9H1X1 276 aaPredicted RBP19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 CARS2Q9HA77 564 aaKnown RBP19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 NTN4Q9HB63 628 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 PRM3Q9NNZ6 103 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 PNPLA3Q9NST1 481 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 MAPRE3Q9UPY8 281 aa19.65■□□□□ 0.74
CHRNA3-202ENST00000348639 SPTBN5Q9NRC6 3674 aaKnown RBP19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 FOXE1O00358 373 aaPredicted RBP19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 PLOD2O00469 737 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 CREG1O75629 220 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 TFAP2AP05549 437 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 C1GALT1C1LP0DN25 315 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 LAMP2P13473 410 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 ZNF23P17027 643 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 TAS2R38P59533 333 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 TSTA3Q13630 321 aaPredicted RBP19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 APOFQ13790 326 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 CST6Q15828 149 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 ITPRIPL2Q3MIP1 535 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 PAGE2BQ5JRK9 111 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 AGBL4Q5VU57 503 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 CES5AQ6NT32 575 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 DOK6Q6PKX4 331 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 ENPP6Q6UWR7 440 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 AMZ2Q86W34 360 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 LAS2Q8IYD9 372 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 FAM86B1Q8N7N1 296 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 FBXO30Q8TB52 745 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 DCAF13Q9NV06 445 aaKnown RBP19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 OLAHQ9NV23 265 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 SH2B3Q9UQQ2 575 aa19.64■□□□□ 0.74
CHRNA3-202ENST00000348639 UPK1AO00322 258 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 FPGTO14772 594 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 PCDH8O95206 1070 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 PCCBP05166 539 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 ANXA4P09525 319 aaPredicted RBP19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 RPS9P46781 194 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 SEC13P55735 322 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 RPS13P62277 151 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 CDK3Q00526 305 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 SF1Q15637 639 aaKnown RBP19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 SLC36A3Q495N2 470 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 PDZD3Q86UT5 571 aa19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 ZNF513Q8N8E2 541 aaPredicted RBP19.64■□□□□ 0.73
CHRNA3-202ENST00000348639 SPDYE1Q8NFV5 336 aaPredicted RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms