RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 CLEC1AQ8NC01 280 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 CDKL2Q92772 493 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PDLIM5Q96HC4 596 aaKnown RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PWWP2AQ96N64 755 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC25A23Q9BV35 468 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 TMUB1Q9BVT8 246 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 KRTAP3-3Q9BYR6 98 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 KRTAP3-2Q9BYR7 98 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 TRIM55Q9BYV6 548 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 FAM129AQ9BZQ8 928 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 MLXIPLQ9NP71 852 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 STOX2Q9P2F5 926 aaPredicted RBP12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 CDC14AQ9UNH5 594 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PDE10AQ9Y233 779 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF451Q9Y4E5 1061 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 PCM1Q15154 2024 aa12.74□□□□□ -0.37
SIRPB3P-201ENST00000340424 IGKV1-8A0A0C4DH67 115 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 H0YGG7 62 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 RAD51CO43502 376 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 DNAJB5O75953 348 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 TSPAN12O95859 305 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 GSTA2P09210 222 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 OTX2P32243 289 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 CSRP3P50461 194 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 ARF3P61204 181 aaPredicted RBP12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 TBPL1P62380 186 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 CKAP4Q07065 602 aaKnown RBP12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 ATP1A4Q13733 1029 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 PRTGQ2VWP7 1150 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 PRAMEF13Q5VWM6 474 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 CPZQ66K79 652 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 DUPD1Q68J44 220 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 SYT10Q6XYQ8 523 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 PTRH1Q86Y79 214 aaKnown RBP12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 CSNK1A1LQ8N752 337 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 TEX19Q8NA77 164 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 PPFIBP2Q8ND30 876 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 KIF18AQ8NI77 898 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 PYROXD1Q8WU10 500 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 ATL1Q8WXF7 558 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 THAP11Q96EK4 314 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 VPS39Q96JC1 886 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 OR2A5Q96R48 311 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 POPDC3Q9HBV1 291 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF304Q9HCX3 659 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 SEMA3GQ9NS98 782 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC22A11Q9NSA0 550 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 TMEM184CQ9NVA4 438 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 ADAMTS6Q9UKP5 1117 aa12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 NOVA2Q9UNW9 492 aaKnown RBP12.73□□□□□ -0.37
SIRPB3P-201ENST00000340424 KCNE1BA0A087WTH5 132 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 LOC105369274A0A096LPK9 316 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 LOC102723532A0A0G2JNH3 316 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 WISP1O95388 367 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 EIF2S1P05198 315 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 MMP11P24347 488 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 GRK3P35626 688 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 CCL11P51671 97 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 RPS15AP62244 130 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 OCA2Q04671 838 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 FAM53BQ14153 422 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 SLC9A5Q14940 896 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 FASTKD3Q14CZ7 662 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 NKG7Q16617 165 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 CAPN13Q6MZZ7 669 aaPredicted RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 AGTRAPQ6RW13 159 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 ADCK2Q7Z695 626 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 STRA8Q7Z7C7 330 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZC3HC1Q86WB0 502 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 OR4N4Q8N0Y3 316 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 NKAPQ8N5F7 415 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 CABS1Q96KC9 395 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 SPSB2Q99619 263 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 HAUS8Q9BT25 410 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 SGPP1Q9BX95 441 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 RHOJQ9H4E5 214 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 P4HTMQ9NXG6 502 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 ARL15Q9NXU5 204 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 TXNDC16Q9P2K2 825 aa12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF282Q9UDV7 671 aaPredicted RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 SPENQ96T58 3664 aaKnown RBP12.72□□□□□ -0.37
SIRPB3P-201ENST00000340424 TENM4Q6N022 2769 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 VSTM2BA6NLU5 285 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 AGPSO00116 658 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 PCDH17O14917 1159 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 NRP2O60462 931 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 CNOT3O75175 753 aaKnown RBP12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 ALPPP05187 535 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 UMODP07911 640 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 FBLP22087 321 aaKnown RBP12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 SOX8P57073 446 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 YBX1P67809 324 aaKnown RBP12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 TLE1Q04724 770 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 C2orf54Q08AI8 447 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 CHAF1BQ13112 559 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 NDUFA9Q16795 377 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 DCAF10Q5QP82 559 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 VWA5B1Q5TIE3 1220 aa12.71□□□□□ -0.37
SIRPB3P-201ENST00000340424 FAM69BQ5VUD6 431 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms