RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 CSTF3Q12996 717 aaKnown RBP13.43□□□□□ -0.26
MKS1-201ENST00000313863 PTPRRQ15256 657 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 ATAD3BQ5T9A4 648 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 NOXRED1Q6NXP6 359 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 ZNF621Q6ZSS3 439 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 ANKS3Q6ZW76 656 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 SYT12Q8IV01 421 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 CRELD1Q96HD1 420 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 FCRL1Q96LA6 429 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 C6orf62Q9GZU0 229 aaPredicted RBP13.43□□□□□ -0.26
MKS1-201ENST00000313863 CRISPLD1Q9H336 500 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 RUBCNLQ9H714 662 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
MKS1-201ENST00000313863 SCAMP3O14828 347 aaKnown RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 ADAMDEC1O15204 470 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 SUV39H1O43463 412 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 GJB5O95377 273 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 OXSR1O95747 527 aaPredicted RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 TRBC1P01850 177 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 APOA1P02647 267 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 PTPN2P17706 415 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 TUFMP49411 452 aaKnown RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 SGSHP51688 502 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 C21orf58P58505 322 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.42□□□□□ -0.26
MKS1-201ENST00000313863 BCL2L1Q07817 233 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 TOR1AIP1Q5JTV8 583 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 COLEC12Q5KU26 742 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 TPRG1LQ5T0D9 272 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 C17orf99Q6UX52 265 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 SLC46A3Q7Z3Q1 461 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 RTN4RL1Q86UN2 441 aaPredicted RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 ZSWIM9Q86XI8 627 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 RASAL3Q86YV0 1011 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 OR8J2Q8NGG1 315 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 C9orf43Q8TAL5 461 aaPredicted RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 METTL2AQ96IZ6 378 aaKnown RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 REXO4Q9GZR2 422 aaKnown RBP13.42□□□□□ -0.26
MKS1-201ENST00000313863 POLE4Q9NR33 117 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 SPASTQ9UBP0 616 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 AASSQ9UDR5 926 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 MKLN1Q9UL63 735 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 PADI2Q9Y2J8 665 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 TMEM98Q9Y2Y6 226 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 PCDHGA6Q9Y5G7 932 aa13.42□□□□□ -0.26
MKS1-201ENST00000313863 A0A0U1RQS6 177 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ZNF840PA6NDX5 716 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CLCA1A8K7I4 914 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 COCHO43405 550 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SOCS5O75159 536 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SNX4O95219 450 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 LRATO95237 230 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 VNN2O95498 520 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 PRAMEF12O95522 483 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 LATS1O95835 1130 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 KLKB1P03952 638 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 CDK1P06493 297 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 COX7A2P14406 83 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ATF6P18850 670 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 TACR1P25103 407 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SOX6P35712 828 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 LIPAP38571 399 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 LRRC74AQ0VAA2 488 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SP140Q13342 867 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 EIF4HQ15056 248 aaKnown RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 TEAD4Q15561 434 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 FRG2Q64ET8 278 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 UBE2R2Q712K3 238 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 ZNF551Q7Z340 670 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 VTCN1Q7Z7D3 282 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 PTOV1Q86YD1 416 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SYNPOQ8N3V7 929 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 VPS37AQ8NEZ2 397 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 DNASE1L2Q92874 299 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 PYCR2Q96C36 320 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 APOLD1Q96LR9 279 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 COL21A1Q96P44 957 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 FRG2BQ96QU4 278 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 RAD9AQ99638 391 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SLC12A9Q9BXP2 914 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 GPR62Q9BZJ7 368 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ZBTB20Q9HC78 741 aaPredicted RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 ZDHHC3Q9NYG2 299 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 TRPM5Q9NZQ8 1165 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 KLHL3Q9UH77 587 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 RUVBL1Q9Y265 456 aaKnown RBP13.41□□□□□ -0.26
MKS1-201ENST00000313863 PCDHB11Q9Y5F2 797 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 LOC110117498-PIK3R3F6TDL0 507 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 HAT1O14929 419 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SLC16A5O15375 505 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 SEPT4O43236 478 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 TBX1O43435 398 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 DYRK3O43781 588 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 UGDHO60701 494 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 DIRAS1O95057 198 aa13.41□□□□□ -0.26
MKS1-201ENST00000313863 MPC1LP0DKB6 136 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms