RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 KRTCAP2Q8N6L1 136 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 HMGB4Q8WW32 186 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 MKL1Q969V6 931 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SKA1Q96BD8 255 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 AURKBQ96GD4 344 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 EVA1BQ9NVM1 165 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 PCDHA2Q9Y5H9 948 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CNOT4O95628 575 aaKnown RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 CCNCP24863 283 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 ARPC4P59998 168 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 OC90Q02509 493 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 LACTB2Q53H82 288 aaPredicted RBP12.33□□□□□ -0.44
USP38-201ENST00000307017 SLC13A3Q8WWT9 602 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 GALPQ9UBC7 116 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 AASSQ9UDR5 926 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 CYTH4Q9UIA0 394 aa12.33□□□□□ -0.44
USP38-201ENST00000307017 SMIM28A0A1B0GU29 152 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 NUPL2O15504 423 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 TYRP1P17643 537 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TNFRSF1BP20333 461 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ACVRL1P37023 503 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 CDH11P55287 796 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 SIRPB2Q5JXA9 342 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ANO7Q6IWH7 933 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 VSIG10LQ86VR7 867 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TIGD4Q8IY51 512 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 KLHL36Q8N4N3 616 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 DQX1Q8TE96 717 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 SDCBP2Q9H190 292 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TLE6Q9H808 572 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 EEF1E1O43324 174 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 ENTPD1P49961 510 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TLE2Q04725 743 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 LCP2Q13094 533 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TSTD2Q5T7W7 516 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 MMAAQ8IVH4 418 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 TTPALQ9BTX7 342 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 DPCDQ9BVM2 203 aaPredicted RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 WRAP73Q9P2S5 460 aaPredicted RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 EBF1Q9UH73 591 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ISPDA4D126 451 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TGDSO95455 350 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 SLC18A1P54219 525 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ATAD3CQ5T2N8 411 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 QSOX2Q6ZRP7 698 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 PNPLA1Q8N8W4 532 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 BANPQ8N9N5 519 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 STOML3Q8TAV4 291 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 WDR20Q8TBZ3 569 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 EIF5A2Q9GZV4 153 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 TMEM185BQ9H7F4 350 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ANKRA2Q9H9E1 313 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 RPL3P39023 403 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 AADACL4Q5VUY2 407 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 HAGHLQ6PII5 290 aaPredicted RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 ELF4Q99607 663 aaPredicted RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 DPYSL5Q9BPU6 564 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 TAC3Q9UHF0 121 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 PEX16Q9Y5Y5 336 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 CPQQ9Y646 472 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 A0A0U1RQS6 177 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 A0A1W2PRB8 838 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 ST3GAL4Q11206 333 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 LRRN1Q6UXK5 716 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 RASGRP3Q8IV61 690 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 PRR18Q8N4B5 295 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 HSFY1Q96LI6 401 aa12.32□□□□□ -0.44
USP38-201ENST00000307017 FBRSL1Q9HCM7 1045 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 LYARQ9NX58 379 aaKnown RBP12.32□□□□□ -0.44
USP38-201ENST00000307017 A0A1W2PPW3 197 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 C6orf47O95873 294 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ADH1CP00326 375 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 RAP2AP10114 183 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ZNF3P17036 446 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SYN1P17600 705 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 AP3S2P59780 193 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 LRRC32Q14392 662 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 GXYLT1Q4G148 440 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 VSTM1Q6UX27 236 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SYVN1Q86TM6 617 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 OR4K1Q8NGD4 311 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 KCTD7Q96MP8 289 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 OR51B6Q9H340 312 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 TP63Q9H3D4 680 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 CILPO75339 1184 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 HERC3Q15034 1050 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 PHF19Q5T6S3 580 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 OR5K1Q8NHB7 308 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 BTN2A3PQ96KV6 586 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 AGXT2Q9BYV1 514 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 OR51I1Q9H343 314 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 TAS2R7Q9NYW3 318 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 AP3M1Q9Y2T2 418 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 B3GALT2O43825 422 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 PRMT3O60678 531 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CLDN7O95471 211 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ACVR1BP36896 505 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 NAA10P41227 235 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms