RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 MAGEL2Q9UJ55 1249 aa9.82□□□□□ -0.84
C9orf43-201ENST00000288462 USP22Q9UPT9 525 aa9.82□□□□□ -0.84
C9orf43-201ENST00000288462 AP3M1Q9Y2T2 418 aa9.82□□□□□ -0.84
C9orf43-201ENST00000288462 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
C9orf43-201ENST00000288462 LRP4O75096 1905 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 SHISA7A6NL88 538 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 H3BQ06 376 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 KCNJ13O60928 360 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 HOXC4P09017 264 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 MTHFD1P11586 935 aaKnown RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 PSMA4P25789 261 aaKnown RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 TIA1P31483 386 aaKnown RBP eCLIP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 CLCNKAP51800 687 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 GTF2A1P52655 376 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 KIAA1024LP59773 190 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 UGT8Q16880 541 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 PYCR3Q53H96 274 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 IER5LQ5T953 404 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 HMBOX1Q6NT76 420 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 DNAJC14Q6Y2X3 702 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 CHST15Q7LFX5 561 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 ERMP1Q7Z2K6 904 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 CAMKMTQ7Z624 323 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 IFNEQ86WN2 208 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 PROSER1Q86XN7 944 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 FAM129CQ86XR2 697 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 C1orf52Q8N6N3 182 aaKnown RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 DENND6BQ8NEG7 585 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 ZNF548Q8NEK5 533 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 LRTOMTQ8WZ04 291 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 STARD8Q92502 1023 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 NELL1Q92832 810 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 ZNF583Q96ND8 569 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 IKZF5Q9H5V7 419 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 FZD3Q9NPG1 666 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 SLC6A13Q9NSD5 602 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 CNOT11Q9UKZ1 510 aaKnown RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 WDR37Q9Y2I8 494 aa9.81□□□□□ -0.84
C9orf43-201ENST00000288462 TNRC18O15417 2968 aaPredicted RBP9.81□□□□□ -0.84
C9orf43-201ENST00000288462 TMEM265A0A087WTH1 108 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3DA0A087WVF3 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3IA0A087WXS9 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3EA0A087X179 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3KA0A087X1G2 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3FA6NER0 549 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3LB9A6J9 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 SCAMP2O15127 329 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 MYO1DO94832 1006 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 LRATO95237 230 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3HP0C7X1 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 CDH1P12830 882 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 GLULP15104 373 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 NCK1P16333 377 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 GGT1P19440 569 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 OXTRP30559 389 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 PIK3CBP42338 1070 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 KIR3DL1P43629 444 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 ASMTP46597 345 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 PLIN5Q00G26 463 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 CTBSQ01459 385 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 SRSF11Q05519 484 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TSTA3Q13630 321 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 MLF2Q15773 248 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 HIST2H2ACQ16777 129 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 GTDC1Q4AE62 458 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 EOGTQ5NDL2 527 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3GQ6DHY5 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 HIST2H2AA3Q6FI13 130 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3CQ6IPX1 549 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 DUS1LQ6P1R4 473 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 GPR180Q86V85 440 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TRIM69Q86WT6 500 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TBC1D3Q8IZP1 549 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 DTWD1Q8N5C7 304 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 PAPD5Q8NDF8 572 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 OR8J2Q8NGG1 315 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 FAM110BQ8TC76 370 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 UBE2E3Q969T4 207 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 MSANTD3Q96H12 275 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 SH3GL1Q99961 368 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 PCBD2Q9H0N5 130 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 RPF2Q9H7B2 306 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 PELI2Q9HAT8 420 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 WASH6PQ9NQA3 447 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 FAM120CQ9NX05 1096 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 SUFUQ9UMX1 484 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 MAPRE3Q9UPY8 281 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 NCKAP1Q9Y2A7 1128 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 TDRKHQ9Y2W6 561 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 CFAP20Q9Y6A4 193 aaKnown RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 UNC80Q8N2C7 3258 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 A0A1W2PPV9 198 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 C10orf142B7Z368 130 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 CACNB4O00305 520 aaPredicted RBP9.8□□□□□ -0.84
C9orf43-201ENST00000288462 SCN2BO60939 215 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 B3GALT4O96024 378 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 UMPSP11172 480 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 UQCRBP14927 111 aa9.8□□□□□ -0.84
C9orf43-201ENST00000288462 NDUFV2P19404 249 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms