RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 MIR1-1HGQ9H1L0 117 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 COL20A1Q9P218 1284 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 PPM1BO75688 479 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 BCKDHAP12694 445 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 FECHP22830 423 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 MAP2K3P46734 347 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NRIP1P48552 1158 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 MLLT6P55198 1093 aaPredicted RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CASP7P55210 303 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ARSHQ5FYA8 562 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SDHAF4Q5VUM1 108 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TMEM53Q6P2H8 277 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 EPGNQ6UW88 154 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ZDHHC24Q6UX98 284 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TMCO2Q7Z6W1 182 aaPredicted RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TMED4Q7Z7H5 227 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 LDB1Q86U70 411 aaPredicted RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 JAGN1Q8N5M9 183 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 PSD4Q8NDX1 1056 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 COQ8AQ8NI60 647 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SCRN2Q96FV2 425 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 C16orf58Q96GQ5 468 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 MSANTD3Q96H12 275 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GAL3ST4Q96RP7 486 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 BARD1Q99728 777 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 HTR3EA5X5Y0 456 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CENPBD1B2RD01 187 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 AURKAO14965 403 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 COQ9O75208 318 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SLC6A6P31641 620 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 DUSP4Q13115 394 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 POC1BQ8TC44 478 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GATAD2BQ8WXI9 593 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SLC22A18Q96BI1 424 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 BIRC7Q96CA5 298 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 PBDC1Q9BVG4 233 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 AKTIPQ9H8T0 292 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 KCNN3Q9UGI6 736 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CASZ1Q86V15 1759 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 E7EQ34 232 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GRID2O43424 1007 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CBSLP0DN79 551 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CBSP35520 551 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 DNASE1L3Q13609 305 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SPIN3Q5JUX0 258 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GID4Q8IVV7 300 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 C4orf32Q8N8J7 132 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 DCBLD1Q8N8Z6 715 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 OR56A1Q8NGH5 318 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 MFSD8Q8NHS3 518 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SHKBP1Q8TBC3 707 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TRUB1Q8WWH5 349 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 PNPLA2Q96AD5 504 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NECAB3Q96P71 396 aaPredicted RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ASPNQ9BXN1 380 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NKX1-2Q9UD57 310 aaPredicted RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SRRDQ9UH36 339 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ERVK-11Q9UQG0 969 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SETD1BQ9UPS6 1966 aaKnown RBP8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SPATA31A5Q5VU36 1347 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SPATA31A7Q8IWB4 1347 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 FAM159BA6NKW6 160 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 A8MT66 165 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NDUFS1P28331 727 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CDK6Q00534 326 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TLE2Q04725 743 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 GLT8D1Q68CQ7 371 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 KCTD9Q7L273 389 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NXPE1Q8N323 547 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 POGLUT1Q8NBL1 392 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 FNDC8Q8TC99 324 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 TM9SF2Q99805 663 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 CCDC32Q9BV29 185 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 SMURF1Q9HCE7 757 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 NDUFAF4Q9P032 175 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
SCUBE3-201ENST00000274938 ABCA6Q8N139 1617 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 SMIM28A0A1B0GU29 152 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 IQCF5A8MTL0 148 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 FFAR2O15552 330 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 HTRA2O43464 458 aaPredicted RBP8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 GLUD1P00367 558 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 DGKGP49619 791 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 C1QTNF8P60827 252 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 BEX3Q00994 111 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 MOB2Q70IA6 237 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 CARM1Q86X55 608 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 CFAP52Q8N1V2 620 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 RPLP0P6Q8NHW5 317 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 TMEM203Q969S6 136 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 HMCESQ96FZ2 354 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 TTYH3Q9C0H2 523 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 NOCTQ9UK39 431 aaKnown RBP8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 STXBP5LQ9Y2K9 1186 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 ABCA9Q8IUA7 1624 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 A0A1W2PP18 115 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 TMEM150CB9EJG8 249 aa8.48□□□□□ -1.05
SCUBE3-201ENST00000274938 C9IYK1 514 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms