RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 ANKRD49Q8WVL7 239 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 ALKBH8Q96BT7 664 aaKnown RBP21.91■■□□□ 1.1
LSM4-201ENST00000252816 HIST1H2AHQ96KK5 128 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 HIST1H2AJQ99878 128 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 H2AFJQ9BTM1 129 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 PCBD2Q9H0N5 130 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 ING2Q9H160 280 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 LRRC4CQ9HCJ2 640 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 ARL15Q9NXU5 204 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 UTP6Q9NYH9 597 aaKnown RBP21.91■■□□□ 1.1
LSM4-201ENST00000252816 MTO1Q9Y2Z2 717 aaKnown RBP21.91■■□□□ 1.1
LSM4-201ENST00000252816 MAU2Q9Y6X3 613 aa21.91■■□□□ 1.1
LSM4-201ENST00000252816 MKRN2OSH3BPM6 223 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 CDC7O00311 574 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 UMODP07911 640 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 GSTA2P09210 222 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 FOLR3P41439 243 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 AP1S2P56377 157 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 ATP1A4Q13733 1029 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 SSPNQ14714 243 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 HKDC1Q2TB90 917 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 CDKL2Q92772 493 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 FKBP10Q96AY3 582 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 ZDHHC18Q9NUE0 388 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 TMEM184CQ9NVA4 438 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 RUVBL1Q9Y265 456 aaKnown RBP21.9■■□□□ 1.1
LSM4-201ENST00000252816 TP53TG5Q9Y2B4 290 aa21.9■■□□□ 1.1
LSM4-201ENST00000252816 MDC1Q14676 2089 aaKnown RBP21.89■■□□□ 1.1
LSM4-201ENST00000252816 P2RX6O15547 441 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 WISP3O95389 354 aaPredicted RBP21.89■■□□□ 1.09
LSM4-201ENST00000252816 GUCA1CO95843 209 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 ALBP02768 609 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 CD63P08962 238 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 GUCY2DQ02846 1103 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 PPP1R3AQ16821 1122 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 MUM1Q2TAK8 710 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 LACTB2Q53H82 288 aaPredicted RBP21.89■■□□□ 1.09
LSM4-201ENST00000252816 PRICKLE2Q7Z3G6 844 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 MRGPREQ86SM8 312 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 RAB43Q86YS6 212 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 ARHGEF39Q8N4T4 335 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 NKAPQ8N5F7 415 aaKnown RBP21.89■■□□□ 1.09
LSM4-201ENST00000252816 NOA1Q8NC60 698 aaKnown RBP21.89■■□□□ 1.09
LSM4-201ENST00000252816 OR56A3Q8NH54 315 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 PTERQ96BW5 349 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 PYCR2Q96C36 320 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 FBXL8Q96CD0 374 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 CPNE1Q99829 537 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 TRIM54Q9BYV2 358 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 CAB39LQ9H9S4 337 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 CTSFQ9UBX1 484 aa21.89■■□□□ 1.09
LSM4-201ENST00000252816 NPEPPSL1A6NEC2 478 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 SUV39H1O43463 412 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 SLC28A2O43868 658 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 PDGFAP04085 211 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 ENO2P09104 434 aaPredicted RBP21.88■■□□□ 1.09
LSM4-201ENST00000252816 PIM1P11309 404 aaPredicted RBP21.88■■□□□ 1.09
LSM4-201ENST00000252816 NPPBP16860 134 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 CCL11P51671 97 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 EMP3P54852 163 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 CSNK1G2P78368 415 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 POU4F1Q01851 419 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 NKG7Q16617 165 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 KBTBD12Q3ZCT8 623 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 TCTN3Q6NUS6 607 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 LCTLQ6UWM7 567 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 PPP1R32Q7Z5V6 425 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 C17orf64Q86WR6 236 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 MMGT1Q8N4V1 131 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 ANKRD7Q92527 254 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 RERGQ96A58 199 aaPredicted RBP21.88■■□□□ 1.09
LSM4-201ENST00000252816 CABS1Q96KC9 395 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 OR4K3Q96R72 315 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 SPSB2Q99619 263 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 RBBP8Q99708 897 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 SLC26A1Q9H2B4 701 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 WDR54Q9H977 334 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 ACSS2Q9NR19 701 aa21.88■■□□□ 1.09
LSM4-201ENST00000252816 NOVA2Q9UNW9 492 aaKnown RBP21.88■■□□□ 1.09
LSM4-201ENST00000252816 HEMK1Q9Y5R4 338 aaPredicted RBP21.88■■□□□ 1.09
LSM4-201ENST00000252816 PABPN1LA6NDY0 278 aaKnown RBP21.87■■□□□ 1.09
LSM4-201ENST00000252816 STATHP02808 62 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 CDH1P12830 882 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 CCND1P24385 295 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 HRH2P25021 359 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 GP5P40197 560 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 SNRPNP63162 240 aaKnown RBP21.87■■□□□ 1.09
LSM4-201ENST00000252816 CAPN13Q6MZZ7 669 aaPredicted RBP21.87■■□□□ 1.09
LSM4-201ENST00000252816 PRMT9Q6P2P2 845 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 VN1R4Q7Z5H5 301 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 CTAGE3PQ8IX95 158 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 FBF1Q8TES7 1133 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 GPR22Q99680 433 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 POPDC3Q9HBV1 291 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 GPAMQ9HCL2 828 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 ZNF304Q9HCX3 659 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 TXNDC16Q9P2K2 825 aa21.87■■□□□ 1.09
LSM4-201ENST00000252816 DMGDHQ9UI17 866 aaKnown RBP21.87■■□□□ 1.09
LSM4-201ENST00000252816 VSTM2BA6NLU5 285 aa21.86■■□□□ 1.09
LSM4-201ENST00000252816 PHGDHO43175 533 aaKnown RBP21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms