RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 ARHGEF7Q14155 803 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ZMAT1Q5H9K5 638 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SYT6Q5T7P8 510 aaPredicted RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SUSD1Q6UWL2 747 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 CHAC2Q8WUX2 184 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 PHF21AQ96BD5 680 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 PYURFQ96I23 114 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SERPINB11Q96P15 392 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ATP13A1Q9HD20 1204 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 DCAF13Q9NV06 445 aaKnown RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SMIM35A0A1B0GVV1 85 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 C2orf81A6NN90 581 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 FADS2P1A8MWK0 482 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 HOXD8P13378 290 aaPredicted RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 NAGAP17050 411 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 CDKN2CP42773 168 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 CRISP3P54108 245 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 DMC1Q14565 340 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF648Q5T619 568 aaPredicted RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 CACHD1Q5VU97 1274 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 CPZQ66K79 652 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF621Q6ZSS3 439 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 ADAMTSL2Q86TH1 951 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 METTL2AQ96IZ6 378 aaKnown RBP13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 GORASP2Q9H8Y8 452 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 C1orf109Q9NX04 203 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 SNX7Q9UNH6 387 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 AP3M1Q9Y2T2 418 aa13.75□□□□□ -0.21
PCDHB3-201ENST00000231130 LTBP4Q8N2S1 1624 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 LOC285095A0A1B0GVY8 99 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 GLUD1P00367 558 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CHRM5P08912 532 aaPredicted RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ICAM2P13598 275 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CTPS1P17812 591 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 HUNKP57058 714 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RPP38P78345 283 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 SLC14A1Q13336 389 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CYP27C1Q4G0S4 372 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 PTRHD1Q6GMV3 140 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 PDE12Q6L8Q7 609 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 KLHDC8BQ8IXV7 354 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 KLHDC9Q8NEP7 349 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 AKAP1Q92667 903 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 DNASE1L2Q92874 299 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RIT1Q92963 219 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RDH12Q96NR8 316 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 C1QTNF7Q9BXJ2 289 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF304Q9HCX3 659 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 LAMA2P24043 3122 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 A0A0G2JMZ2 1700 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 LRRC37A2A6NM11 1700 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CBX4O00257 560 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 OR7A17O14581 309 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 PCDHGA12O60330 932 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ERN1O75460 977 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 SCELO95171 688 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ITGA2P17301 1181 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 HLA-DPA1P20036 260 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 TNFRSF1BP20333 461 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RPS3P23396 243 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ERP29P30040 261 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 S100A3P33764 101 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 NUDT1P36639 197 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 AP2S1P53680 142 aaPredicted RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 GRIK2Q13002 908 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 TARDBPQ13148 414 aaKnown RBP eCLIP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 PTCHD3Q3KNS1 767 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 SPATS1Q496A3 300 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 OR2T5Q6IEZ7 315 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 LINGO4Q6UY18 593 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RNF175Q8N4F7 328 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 OR8J3Q8NGG0 315 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 OR2T29Q8NH02 315 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CD200R1Q8TD46 325 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 DIABLOQ9NR28 239 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CCDC59Q9P031 241 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 NUP50Q9UKX7 468 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 GRIP1Q9Y3R0 1128 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 CAPN5O15484 640 aaPredicted RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RPLP0P05388 317 aaKnown RBP13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 GRK5P34947 590 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 EFR3AQ14156 821 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 POU4F3Q15319 338 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF792Q3KQV3 632 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 NLRP8Q86W28 1048 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 FAM217AQ8IXS0 508 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 RGL4Q8IZJ4 473 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 TTC9BQ8N6N2 239 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 C7orf57Q8NEG2 295 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ST8SIA2Q92186 375 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 MTERF3Q96E29 417 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ZNF382Q96SR6 550 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 BCL7BQ9BQE9 202 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 ELOVL6Q9H5J4 265 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 GPRC5BQ9NZH0 403 aa13.74□□□□□ -0.21
PCDHB3-201ENST00000231130 NPAP1Q9NZP6 1156 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms