RNA–Protein interactions for RNA: ENSMUST00000182047.1

Rnf4-204, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,944 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-204ENSMUST00000182047 Pramef20B1ARV6 477 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Sult2a6B2RVI8 285 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Polr2jO08740 117 aaKnown RBP13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Gsta1P13745 223 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Esr1P19785 599 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Nfatc3P97305 1075 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Cdk18Q04899 451 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Fam105aQ3TVP5 353 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Gsta1Q6P8Q0 223 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Paqr3Q6TCG8 311 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Olfr1252Q7TQZ2 314 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 PdprQ7TSQ8 878 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Efemp1Q8BPB5 493 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Nrn1lQ8C4W3 162 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ugt2b34Q8K154 532 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Efhd2Q9D8Y0 240 aaKnown RBP13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Bpifa3Q9D9J8 232 aa13.04□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Itga8A2ARA8 1062 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ttll2A4Q9E4 540 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Nthl1O35980 300 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 ClppO88696 272 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Slc22a15Q504N2 544 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ssr4Q62186 172 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Bend6Q6PFX2 281 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Olfr813Q7TRH5 310 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 RragdQ7TT45 449 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Pex5lQ8C437 567 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Acat2Q8CAY6 397 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 P3h2Q8CG71 703 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Kctd5Q8VC57 234 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Znf24Q91VN1 368 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Basp1Q91XV3 226 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Slc35a5Q921R7 437 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Wdr73Q9CWR1 371 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 RtcAQ9D7H3 366 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 SrpraQ9DBG7 636 aaKnown RBP13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Olfr663A0A1B0GSI9 319 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Sec14l5B2RXM5 696 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Krt83E9Q1Y9 479 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 GuloP58710 440 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ap2m1P84091 435 aaKnown RBP13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Psme2P97372 239 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Tgm3Q08189 693 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ggt1Q60928 568 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ifit3Q64345 403 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Kmt5cQ6Q783 468 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ube2r2Q6ZWZ2 238 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 AW551984Q8BGF0 804 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Elmo1Q8BPU7 727 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 GmppbQ8BTZ7 360 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ankrd49Q8VE42 238 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Uts2rQ8VIH9 385 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Pcdhb8Q91XZ2 779 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Atg13Q91YI1 516 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Cmtm8Q9CZR4 173 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 DynapQ9D7M5 161 aa13.03□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Man1b1A2AJ15 658 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Znf711A2ANX9 761 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 4930455H04RikD3Z622 58 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Pgbd1E9Q492 415 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Gm8011K7N6Y5 207 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Kpna4O35343 521 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Entpd2O55026 495 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Btnl2O70355 454 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Pxmp2P42925 194 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Hnrnpa1P49312 320 aaKnown RBP13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Sox9Q04887 507 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 NkaplQ5SZT7 395 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Fam149b1Q6NSV7 578 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 AftphQ80WT5 931 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 IlkapQ8R0F6 392 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Cops8Q8VBV7 209 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Olfr357Q8VFP4 308 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Efcab1Q9D3N2 212 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Clec2gQ9D676 269 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Ccdc70Q9D9B0 223 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Zbp1Q9QY24 411 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Col12a1Q60847 3120 aa13.02□□□□□ -0.32
Rnf4-204ENSMUST00000182047 Lgr4A2ARI4 951 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr1153A2AVC0 318 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Gm8267E9Q207 261 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 P01665 111 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 P01666 111 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Csf2rb2P26954 878 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Ntsr2P70310 416 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 A630001G21RikQ3UTB2 229 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 WhammQ571B6 793 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Slc25a51Q5HZI9 298 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Pou4f2Q63934 411 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Mfn1Q811U4 741 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fbxl21Q8BFZ4 434 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Fam110bQ8C739 366 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Piwil2Q8CDG1 971 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Znf628Q8CJ78 1038 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Olfr1310Q8VF85 312 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nkx2-4Q9EQM3 354 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 B4galt6Q9WVK5 382 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Rad9aQ9Z0F6 389 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 CroccQ8CJ40 2009 aa13.02□□□□□ -0.33
Rnf4-204ENSMUST00000182047 Nt5c1aA3KFX0 365 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms