RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Rpp38Q80UU2 280 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Sumf2Q8BPG6 308 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Wwp2Q9DBH0 870 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Trhr2Q9ERT2 382 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 A0A286YCD0 109 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Cldn2O88552 230 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ruvbl1P60122 456 aaKnown RBP15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Stx4P70452 298 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 BcheQ03311 603 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Smpd1Q04519 627 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Mat2aQ3THS6 395 aaKnown RBP15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Bbs1Q3V3N7 593 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Opa3Q505D7 179 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 PtprnQ60673 979 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Gm16286Q9CQX6 220 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 FancgQ9EQR6 623 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Lmx1aQ9JKU8 382 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Esp31A8R0W3 114 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Esr1P19785 599 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Lhx3P50481 400 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Olfr834Q7TRG8 312 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Rap2aQ80ZJ1 183 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Fbxo48Q8CAT8 161 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 St7lQ8K4P7 559 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Tmem203Q8R235 136 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ubqln1Q8R317 582 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Ptgr1Q91YR9 329 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Coro6Q920M5 471 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Mri1Q9CQT1 369 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Nol3Q9D1X0 220 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 SgshQ9EQ08 502 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Mbtps1Q9WTZ2 1052 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 Asb4Q9WV71 426 aa15.15■□□□□ 0.02
Ccdc88b-201ENSMUST00000113440 PomkQ3TUA9 349 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Fcho2Q3UQN2 809 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 IpmkQ7TT16 396 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 NanogQ80Z64 305 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Slc39a9Q8BFU1 308 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ttc34Q8C0Q3 554 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Galnt13Q8CF93 556 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Clec2gQ9D676 269 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Tcea2Q9QVN7 299 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Scgb2b17S4R2V3 82 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Sult2a6B2RVI8 285 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Vmn2r22E9Q7S8 853 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Hsd17b10O08756 261 aaKnown RBP15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Mthfd2P18155 350 aaKnown RBP15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Hrh1P70174 488 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Bcl2a1bQ497M6 172 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ldoc1Q7TPY9 151 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Kcng4Q80XM3 506 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Fam46bQ8C152 427 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Thap1Q8CHW1 210 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Hmgcs1Q8JZK9 520 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Phf10Q9D8M7 497 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Mapk11Q9WUI1 364 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Pramef6A2A8M8 474 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gria2P23819 883 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Khdc4Q3TCX3 612 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Znrf3Q5SSZ7 913 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Tas2r38Q7TQA6 331 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Rcn3Q8BH97 328 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ptgr2Q8VDQ1 351 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Idh3aQ9D6R2 366 aaKnown RBP15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 SpastQ9QYY8 614 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ralgps1A2AR50 585 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Cilp2D3Z7H8 1162 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gm20828J3KMI7 228 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gp5O08742 567 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Dmp1O55188 503 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Klf10O89091 479 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ccnb2P30276 398 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Aldh16a1Q571I9 802 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Sema3dQ8BH34 777 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Tmem150aQ91WN2 271 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 EtfaQ99LC5 333 aaKnown RBP15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Uba7Q9DBK7 977 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 AnkhQ9JHZ2 492 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Rdh11Q9QYF1 316 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ubqln2Q9QZM0 638 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 FAM186AQ9D9R9 1790 aa15.14■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Chd5A2A8L1 1946 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Cyp1a1P00184 524 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ptger3P30557 365 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Pitx1P70314 315 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Rsrp1Q3UC65 298 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Fam71bQ5STT6 665 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Prrt3Q6PE13 971 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Paqr3Q6TCG8 311 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Frs2Q8C180 508 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Cd207Q8VBX4 331 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Tmem159Q922Z1 161 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Tex13bQ99MW5 186 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gadd45gip1Q9CR59 222 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Lamb1P02469 1786 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gm3854A0A1B0GSS6 495 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gp1baO35930 734 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 DxoO70348 397 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Gstm1P10649 218 aa15.13■□□□□ 0.01
Ccdc88b-201ENSMUST00000113440 Ccr4P51680 360 aa15.13■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 39 ms