RNA–Protein interactions for RNA: ENSMUST00000061209.6

Ccdc71-201, Transcript of Coiled-coil domain-containing protein 71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc71, Length 3,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71-201ENSMUST00000061209 Ceacam1P31809 521 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Hcls1P49710 486 aaKnown RBP12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ap5b1Q3TAP4 876 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Serpinb1cQ5SV42 375 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Kcna4Q61423 654 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Pfkfb4Q6DTY7 469 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Znf366Q6NS86 746 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cpa1Q7TPZ8 419 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Megf11Q80T91 1091 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Avl9Q80U56 649 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ap4e1Q80V94 1122 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Apbb3Q8R1C9 486 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Retreg1dQ8VE91 480 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Syt17Q920M7 470 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ceacam2Q925P2 520 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Dpy30Q99LT0 99 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Tas2r119Q9JKT2 335 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Igkv6-20A0A140T8P2 115 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 A0A286YCH8 300 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 3110040M04RikA0A286YDK0 300 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 A0A286YDP4 300 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 A0A286YE43 300 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ephb6O08644 1014 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Anxa6P14824 673 aaKnown RBP12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Hoxb9P20615 250 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 UoxP25688 303 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 MazP56671 477 aaKnown RBP12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Lrrc3P59034 257 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cpt1aP97742 773 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 TpbglQ8C013 384 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Sh3glb2Q8R3V5 400 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Lsm1Q8VC85 133 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Def8Q99J78 448 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gm16286Q9CQX6 220 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Utp11Q9CZJ1 253 aaKnown RBP12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Hacd2Q9D3B1 254 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gpn3Q9D3W4 284 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Tlr4Q9QUK6 835 aa12.6□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Olfr1253A2AUA2 318 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 L3mbtl4B1B1A0 621 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 BC051665E9Q623 330 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Trim55G3X8Y1 545 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cdkn2bP55271 130 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Bmp1P98063 991 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Spata6Q3U6K5 488 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gm527Q4KL13 310 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 UnklQ5FWH2 727 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Slc13a5Q67BT3 572 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 SvoplQ6PDF3 494 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Nadsyn1Q711T7 725 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Olfr1251Q7TQZ3 318 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Rtp2Q80ZI2 223 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cxcr1Q810W6 351 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Q8BP99 230 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Acsm2Q8K0L3 575 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Adgrg1Q8K209 687 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gsg1Q8R1W2 324 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ptgr1Q91YR9 329 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 EtfdhQ921G7 616 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 4930550L24RikQ99PA7 320 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Pnp2Q9D8C9 305 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Pfn3Q9DAD6 137 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Rrp8Q9DB85 457 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 VarsQ9Z1Q9 1263 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Plxnd1Q3UH93 1925 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Srsf5O35326 269 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Nrp2O35375 931 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gnpda1O88958 289 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Dab2P98078 766 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Fezf1Q0VDQ9 475 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Tas2r131Q7M708 310 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Pcdh8Q7TSK3 1070 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Fndc11Q80WB0 326 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 PeloQ80X73 385 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 C1rbQ8CFG9 706 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cnot6Q8K3P5 557 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Q91W34 466 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Dnajc9Q91WN1 259 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Csnk1eQ9JMK2 416 aaKnown RBP12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Gpc1Q9QZF2 557 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Myo15bI7HPW8 3033 aa12.59□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Zfp599E9PWP1 548 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ift81O35594 676 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Akap10O88845 662 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Serpind1P49182 478 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 NrtnP97463 195 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Tmem173Q3TBT3 378 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Olfr463Q5SW49 311 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Olfr462Q5SW50 311 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Fbxo30Q8BJL1 746 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Crtc3Q91X84 619 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Cers2Q924Z4 380 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 4921530L21RikQ9CQ47 274 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 MINDY3Q9CV28 444 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 2010109A12RikQ9D875 119 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Phospho2Q9D9M5 241 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ampd2Q9DBT5 798 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Ing2Q9ESK4 281 aa12.58□□□□□ -0.39
Ccdc71-201ENSMUST00000061209 Fam217bA2AJW5 387 aa12.58□□□□□ -0.4
Ccdc71-201ENSMUST00000061209 1600015I10RikE9Q745 711 aa12.58□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms