RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PPP1R14CQ8TAE6 165 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 HMGCLL1Q8TB92 370 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 PPP4R1Q8TF05 950 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 UBTD2Q8WUN7 234 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 ZNF570Q96NI8 536 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 CDC6Q99741 560 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 CCDC3Q9BQI4 270 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 ACAT2Q9BWD1 397 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 C1orf21Q9H246 121 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 NPHS2Q9NP85 383 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 SPHK1Q9NYA1 384 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 STOML1Q9UBI4 398 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 OPTCQ9UBM4 332 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 SLC22A14Q9Y267 594 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 ASB1Q9Y576 335 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 ANGPTL3Q9Y5C1 460 aa13.95□□□□□ -0.18
LINC00339-208ENST00000634934 IGHV1OR21-1A0A087WYE8 117 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 PIPSLA2A3N6 862 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 OR5K3A6NET4 321 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 TRIM13O60858 407 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 DIAPH2O60879 1101 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 CBFA2T3O75081 653 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 IMPDH1P20839 514 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 SLC6A12P48065 614 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 NAGLUP54802 743 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 HERVK_113P63132 956 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 OCRLQ01968 901 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 ASPHQ12797 758 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 NR1D2Q14995 579 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 PCBP2Q15366 365 aaKnown RBP eCLIP13.94□□□□□ -0.181e-7■■■□□ 14.9
LINC00339-208ENST00000634934 CCDC157Q569K6 752 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 CFAP157Q5JU67 520 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 PIP4P1Q86T03 277 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 THOC6Q86W42 341 aaKnown RBP13.94□□□□□ -0.18
LINC00339-208ENST00000634934 LRRC56Q8IYG6 542 aaPredicted RBP13.94□□□□□ -0.18
LINC00339-208ENST00000634934 OR56A3Q8NH54 315 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 STON2Q8WXE9 905 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 NCSTNQ92542 709 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 MOCOSQ96EN8 888 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 ERVK-6Q9BXR3 956 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 SYNDIG1Q9H7V2 258 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 DNAJC11Q9NVH1 559 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 INTS7Q9NVH2 962 aaKnown RBP13.94□□□□□ -0.18
LINC00339-208ENST00000634934 ACTR10Q9NZ32 417 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 TAC3Q9UHF0 121 aa13.94□□□□□ -0.18
LINC00339-208ENST00000634934 A0A1W2PPV9 198 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 A8MUI8 341 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 CAPN14A8MX76 684 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 C2orf74A8MZ97 194 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 K7EPI3 171 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 GSC2O15499 205 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 DUX1O43812 170 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 SUPT7LO94864 414 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 RPLP0P05388 317 aaKnown RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 ATP6V1C1P21283 382 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 PSMB5P28074 263 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 PEBP1P30086 187 aaKnown RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 CAPZBP47756 277 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 DNAJB13P59910 316 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 GPLD1P80108 840 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 KIR2DS3Q14952 304 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 ZNF678Q5SXM1 525 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 PRAMEF13Q5VWM6 474 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 IRGCQ6NXR0 463 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 ZCCHC23Q6ZST2 131 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 USP53Q70EK8 1073 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 RPS27LQ71UM5 84 aaKnown RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 LRRC70Q7Z2Q7 622 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 BAHD1Q8TBE0 780 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 SLC22A18Q96BI1 424 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 NAF1Q96HR8 494 aaKnown RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 SGPP1Q9BX95 441 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 SLC32A1Q9H598 525 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 DENND2DQ9H6A0 471 aaPredicted RBP13.93□□□□□ -0.18
LINC00339-208ENST00000634934 HEY2Q9UBP5 337 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 PCDHB11Q9Y5F2 797 aa13.93□□□□□ -0.18
LINC00339-208ENST00000634934 CASC3O15234 703 aaKnown RBP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 TNFSF14O43557 240 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 RPS17P08708 135 aaKnown RBP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 UGT2B7P16662 529 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 BGNP21810 368 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 SDHBP21912 280 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 ACP1P24666 158 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 CD1CP29017 333 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 CDH13P55290 713 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 CCL7P80098 99 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 PUM1Q14671 1186 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 SF1Q15637 639 aaKnown RBP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 CHI3L2Q15782 390 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 UNC50Q53HI1 259 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 RFWD2Q8NHY2 731 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 L3HYPDHQ96EM0 354 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 NSUN5Q96P11 429 aaKnown RBP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 OR4K3Q96R72 315 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 MIPEPQ99797 713 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 GATA5Q9BWX5 397 aaPredicted RBP13.92□□□□□ -0.18
LINC00339-208ENST00000634934 TMEM120AQ9BXJ8 343 aa13.92□□□□□ -0.18
LINC00339-208ENST00000634934 CADM1Q9BY67 442 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms