RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 ATP5F1P24539 256 aaPredicted RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 VARSP26640 1264 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 CCKBRP32239 447 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ETV5P41161 510 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CDH13P55290 713 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 CES4AQ5XG92 561 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 FIGLAQ6QHK4 219 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 LCTLQ6UWM7 567 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 KLHDC8AQ8IYD2 350 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 TEX9Q8N6V9 391 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 C19orf47Q8N9M1 422 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 WDR48Q8TAF3 677 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 KLHL6Q8WZ60 621 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 ZNF768Q9H5H4 540 aaKnown RBP13.11□□□□□ -0.31
NEK3-210ENST00000620675 APMAPQ9HDC9 416 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 PCTPQ9UKL6 214 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 KLK13Q9UKR3 277 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 WASF3Q9UPY6 502 aa13.11□□□□□ -0.31
NEK3-210ENST00000620675 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 CCDC189A1A4V9 331 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 ZNF839A8K0R7 811 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 DYNC1I1O14576 645 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 HAT1O14929 419 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 PRPF4O43172 522 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEK3-210ENST00000620675 STATHP02808 62 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 MYL2P10916 166 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 CPA3P15088 417 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 CD22P20273 847 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 ALDH3A1P30838 453 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
NEK3-210ENST00000620675 WDR4P57081 412 aaKnown RBP13.1□□□□□ -0.31
NEK3-210ENST00000620675 PCBP2Q15366 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
NEK3-210ENST00000620675 GPR19Q15760 415 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 ATG14Q6ZNE5 492 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 GOLGA7Q7Z5G4 137 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 C17orf64Q86WR6 236 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 CNPY4Q8N129 248 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 TCAIMQ8N3R3 496 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 SNX31Q8N9S9 440 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 MDM1Q8TC05 714 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 MGARPQ8TDB4 240 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 SLC22A18Q96BI1 424 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 SLC41A2Q96JW4 573 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 DNAJC11Q9NVH1 559 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 SOHLH2Q9NX45 425 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 OPTCQ9UBM4 332 aa13.1□□□□□ -0.31
NEK3-210ENST00000620675 WDR91A4D1P6 747 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 H3BQF6 201 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 K7EPI3 171 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 RPS17P08708 135 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 NELFEP18615 380 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 CMPK1P30085 196 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 PRKAA2P54646 552 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 NFKB2Q00653 900 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 CDC16Q13042 620 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 ZNF678Q5SXM1 525 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 ADNP2Q6IQ32 1131 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 ZNF425Q6IV72 752 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 FOXR1Q6PIV2 292 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 ZCCHC23Q6ZST2 131 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 DGLUCYQ7Z3D6 616 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 TMPRSS11BQ86T26 416 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 PAQR7Q86WK9 346 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 TMPRSS12Q86WS5 348 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 OR52B6Q8NGF0 335 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 TMEM74Q96NL1 305 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 CDK15Q96Q40 435 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 DEPDC7Q96QD5 511 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 CD180Q99467 661 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 SSU72Q9NP77 194 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 OXSMQ9NWU1 459 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 SIDT1Q9NXL6 827 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 TPRP12270 2363 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 OR2A25A4D2G3 310 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 STX16-NPEPL1H3BU86 382 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 OR7A17O14581 309 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 STX16O14662 325 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 LCMT2O60294 686 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 ZBTB11O95625 1053 aaPredicted RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 ANKRD34CP0C6C1 535 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 FGF3P11487 239 aaPredicted RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 CCND1P24385 295 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 GABRA4P48169 554 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 NAGLUP54802 743 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 SNRPNP63162 240 aaKnown RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 CSNK1G2P78368 415 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 CYP4F3Q08477 520 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 GTF2H2Q13888 395 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 PDK4Q16654 411 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 CLPPQ16740 277 aaPredicted RBP13.09□□□□□ -0.31
NEK3-210ENST00000620675 C3orf38Q5JPI3 329 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 PRAMEF17Q5VTA0 474 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 FRMPD2BQ6IN97 320 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 GTF2H2CQ6P1K8 395 aa13.09□□□□□ -0.31
NEK3-210ENST00000620675 FBXO42Q6P3S6 717 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms