RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 CTAGE3PQ8IX95 158 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 COL26A1Q96A83 441 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 ALKBH8Q96BT7 664 aaKnown RBP20.91■□□□□ 0.94
CBWD3-207ENST00000611426 MFSD3Q96ES6 412 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 NSMCE4AQ9NXX6 385 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 GPN3Q9UHW5 284 aaPredicted RBP20.91■□□□□ 0.94
CBWD3-207ENST00000611426 CDYLQ9Y232 598 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 ZNF451Q9Y4E5 1061 aa20.91■□□□□ 0.94
CBWD3-207ENST00000611426 A6NL46 340 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 CD3EAPO15446 510 aaKnown RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 ZSCAN9O15535 394 aaPredicted RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 PRPF4O43172 522 aaKnown RBP eCLIP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 GPC4O75487 556 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 KRT38O76015 456 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 SNRPAP09012 282 aaKnown RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 NMBRP28336 390 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 PEBP1P30086 187 aaKnown RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 PKLRP30613 574 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 OTX2P32243 289 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 MDH1P40925 334 aaKnown RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 TTPAP49638 278 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 RRADP55042 308 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 NADK2Q4G0N4 442 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 TLDC1Q6P9B6 456 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 TIFABQ6ZNK6 161 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 FAM20CQ8IXL6 584 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 DNAJC22Q8N4W6 341 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 ZNF655Q8N720 491 aaPredicted RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 EFCAB3Q8N7B9 438 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 FDCSPQ8NFU4 85 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 LKAAEAR1Q8TD35 194 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 CPNE1Q99829 537 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 MCMBPQ9BTE3 642 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 TXLNGQ9NUQ3 528 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 ANKMY1Q9P2S6 941 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 PLCL2Q9UPR0 1127 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 PCDHGB7Q9Y5F8 929 aa20.9■□□□□ 0.94
CBWD3-207ENST00000611426 SNRNP200O75643 2136 aaKnown RBP20.9■□□□□ 0.94
CBWD3-207ENST00000611426 RP1L1Q8IWN7 2480 aaPredicted RBP20.89■□□□□ 0.94
CBWD3-207ENST00000611426 PRMT5O14744 637 aaPredicted RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 KLF7O75840 302 aaPredicted RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 CTSBP07858 339 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 CD63P08962 238 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 KRT15P19012 456 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 PAMP19021 973 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 DCDP81605 110 aaKnown RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 ATP1A4Q13733 1029 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 PTRHD1Q6GMV3 140 aaKnown RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 SH2D5Q6ZV89 423 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 SRRM1Q8IYB3 904 aaKnown RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 C2orf73Q8N5S3 287 aaPredicted RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 PROKR1Q8TCW9 393 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 GBP5Q96PP8 586 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 ZFATQ9P243 1243 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 MARCH4Q9P2E8 410 aaPredicted RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 IFT80Q9P2H3 777 aaPredicted RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 DHCR7Q9UBM7 475 aaKnown RBP20.89■□□□□ 0.93
CBWD3-207ENST00000611426 NDOR1Q9UHB4 597 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 CIDEBQ9UHD4 219 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 SRPK3Q9UPE1 567 aa20.89■□□□□ 0.93
CBWD3-207ENST00000611426 NAV2Q8IVL1 2488 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 VPS4BO75351 444 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CD9P21926 228 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 ARNTP27540 789 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 AOAHP28039 575 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 GP5P40197 560 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 SLC18A2Q05940 514 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 SSPNQ14714 243 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 TERF2Q15554 542 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 TEDDM1Q5T9Z0 273 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CES3Q6UWW8 571 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 UNC5DQ6UXZ4 953 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 KCNMB4Q86W47 210 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 DCUN1D3Q8IWE4 304 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 FAM26EQ8N5C1 309 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 LINC01555Q8NAE3 123 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CPT1CQ8TCG5 803 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 SLC22A18Q96BI1 424 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 IP6K3Q96PC2 410 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 NDC1Q9BTX1 674 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 NUDT9Q9BW91 350 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CAPS2Q9BXY5 557 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 MKS1Q9NXB0 559 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CAMSAP3Q9P1Y5 1249 aaPredicted RBP20.88■□□□□ 0.93
CBWD3-207ENST00000611426 VPS4AQ9UN37 437 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 KLHL20Q9Y2M5 609 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 PTRH2Q9Y3E5 179 aaKnown RBP20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CCDC88CQ9P219 2028 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 FER1L5A0AVI2 2057 aa20.88■□□□□ 0.93
CBWD3-207ENST00000611426 CLEC18AA5D8T8 446 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 DPM1O60762 260 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 PIAS1O75925 651 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 SLCO2B1O94956 709 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 MAGP20916 626 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 FOLR3P41439 243 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 SRSF1Q07955 248 aaKnown RBP eCLIP20.87■□□□□ 0.93
CBWD3-207ENST00000611426 ILF2Q12905 390 aaKnown RBP20.87■□□□□ 0.93
CBWD3-207ENST00000611426 GRTP1Q5TC63 336 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 TTC23LQ6PF05 361 aa20.87■□□□□ 0.93
CBWD3-207ENST00000611426 CLEC18BQ6UXF7 455 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms