RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 LGALS12Q96DT0 336 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 APIPQ96GX9 242 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DEPDC7Q96QD5 511 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF347Q96SE7 839 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CNPPD1Q9BV87 410 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SACM1LQ9NTJ5 587 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 UTS2RQ9UKP6 389 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ANGPT4Q9Y264 503 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 RUVBL1Q9Y265 456 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DLGAP4Q9Y2H0 992 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDHGB3Q9Y5G1 929 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 GPC6Q9Y625 555 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SSC5DA1L4H1 1573 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SDK1Q7Z5N4 2213 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 LSM1O15116 133 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ADAMDEC1O15204 470 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDH7O60245 1069 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PCDH8O95206 1070 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ALPLP05186 524 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 NR2F1P10589 423 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 BPIP17213 487 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ITGA2P17301 1181 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PFKLP17858 780 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 MYL12AP19105 171 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 GSTM2P28161 218 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PPP2R1BP30154 601 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 HOXC13P31276 330 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PIGAP37287 484 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CLCN4P51793 760 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 RPS7P62081 194 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 MEF2AQ02078 507 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DUOXA1Q1HG43 343 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SPATS1Q496A3 300 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ATP13A5Q4VNC0 1218 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 MPPE1Q53F39 396 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ARHGAP15Q53QZ3 475 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 KIAA1614Q5VZ46 1190 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TMEM220Q6QAJ8 160 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 BHLHA9Q7RTU4 235 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TAS1R1Q7RTX1 841 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SPRED1Q7Z699 444 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DCP2Q8IU60 420 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TCAIMQ8N3R3 496 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CHDHQ8NE62 594 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 NDNFQ8TB73 568 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TRUB1Q8WWH5 349 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 REPS1Q96D71 796 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ZNF583Q96ND8 569 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TUBA1CQ9BQE3 449 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 HTATIP2Q9BUP3 242 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 OR51B5Q9H339 312 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TBCCD1Q9NVR7 557 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 AHSPQ9NZD4 102 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ABCD2Q9UBJ2 740 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PRSS21Q9Y6M0 314 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DRGXA6NNA5 263 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM25AB3EWG3 89 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM25CB3EWG5 89 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 FAM25GB3EWG6 89 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 IDH3BO43837 385 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CACNG3O60359 315 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SNX4O95219 450 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SOX14O95416 240 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 C8GP07360 202 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TCF3P15923 654 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TACR1P25103 407 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 BDKRB1P46663 353 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SGSHP51688 502 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 MRPL28Q13084 256 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CDK5R2Q13319 367 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 VMACQ2NL98 169 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TYSND1Q2T9J0 566 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 IFI44LQ53G44 452 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 CAPN13Q6MZZ7 669 aaPredicted RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 NIPAL1Q6NVV3 410 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ZZZ3Q8IYH5 903 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 C19orf18Q8NEA5 215 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ENKURQ8TC29 256 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 ZFP90Q8TF47 636 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 RPL3LQ92901 407 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TMEM203Q969S6 136 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 EXOSC8Q96B26 276 aaKnown RBP6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 C1GALT1C1Q96EU7 318 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 BBS4Q96RK4 519 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 KCNH6Q9H252 994 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 TRIM39Q9HCM9 518 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 PRDM8Q9NQV8 689 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 SNTG1Q9NSN8 517 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 B4GALT6Q9UBX8 382 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 OARD1Q9Y530 152 aa6.67□□□□□ -1.34
SYNPO2-206ENST00000610556 M0R129 80 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 CCL16O15467 120 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 SLC28A2O43868 658 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 GADD45GO95257 159 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PRAMEF12O95522 483 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 B3GALT4O96024 378 aa6.66□□□□□ -1.34
SYNPO2-206ENST00000610556 PPIBP23284 216 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms