RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 PELI2Q9HAT8 420 aa16.33■□□□□ 0.2
PRKCSH-203ENST00000586486 SLC6A20Q9NP91 592 aa16.33■□□□□ 0.2
PRKCSH-203ENST00000586486 HEATR5BQ9P2D3 2071 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 E7EQ34 232 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 OR7A17O14581 309 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CLGNO14967 610 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 UGDHO60701 494 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 MAGP20916 626 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CDH3P22223 829 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 GRIA3P42263 894 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CDH13P55290 713 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 YBX1P67809 324 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CHI3L2Q15782 390 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 TBCCQ15814 346 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 SLCO4C1Q6ZQN7 724 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 ZCCHC23Q6ZST2 131 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 RPS27LQ71UM5 84 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 KMT5CQ86Y97 462 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 ZUFSPQ96AP4 578 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CNDP1Q96KN2 507 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 PPM1MQ96MI6 270 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 TRAPPC9Q96Q05 1148 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 ZNF382Q96SR6 550 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 DPH7Q9BTV6 452 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 NTMT1Q9BV86 223 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CHRNA10Q9GZZ6 450 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 NOL11Q9H8H0 719 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 SEMA4BQ9NPR2 832 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 CUEDC1Q9NWM3 386 aaPredicted RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 APOBEC2Q9Y235 224 aaKnown RBP16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 ADAMTS20P59510 1910 aa16.32■□□□□ 0.2
PRKCSH-203ENST00000586486 IGHV5-10-1A0A0J9YXX1 117 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 SPAARA0A1B0GVQ0 90 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 OR2A25A4D2G3 310 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 TMEM114B3SHH9 223 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 KIF1CO43896 1103 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 PRAMEF4O60810 478 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 OTCP00480 354 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 FTH1P19P0C7X4 201 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 CDH1P12830 882 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 BGNP21810 368 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 CASP2P42575 452 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 ATP1A2P50993 1020 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 NOVA1P51513 510 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 INSM1Q01101 510 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 RELAQ04206 551 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 GALNT1Q10472 559 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 TRAF3Q13114 568 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 TRA2AQ13595 282 aaKnown RBP eCLIP16.31■□□□□ 0.22e-12■■■□□ 17.6
PRKCSH-203ENST00000586486 RCN2Q14257 317 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 PRAMEF9Q5VWM5 478 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 CDCP2Q5VXM1 449 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 ATG9BQ674R7 924 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 NXPE4Q6UWF7 544 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 RBM44Q6ZP01 1051 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 TMPRSS11BQ86T26 416 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 SLCO6A1Q86UG4 719 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 FAM20CQ8IXL6 584 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 OR4K1Q8NGD4 311 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 PPP1R14CQ8TAE6 165 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 MOCOSQ96EN8 888 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 DRC3Q9H069 523 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 ZNF768Q9H5H4 540 aaKnown RBP16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 TMEM184CQ9NVA4 438 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 SNX7Q9UNH6 387 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 PIEZO1Q92508 2521 aa16.31■□□□□ 0.2
PRKCSH-203ENST00000586486 IGHV5-51A0A0C4DH38 117 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 KLF11O14901 512 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 RASSF9O75901 435 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 WFS1O76024 890 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 SNUPNO95149 360 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 ZBTB11O95625 1053 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 C1GALT1C1LP0DN25 315 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 NEFHP12036 1026 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 ST6GAL1P15907 406 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 CCR8P51685 355 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 PDX1P52945 283 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 PKNOX1P55347 436 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 SIM1P81133 766 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 IRF8Q02556 426 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 ZFP36L1Q07352 338 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 CATSPEREQ5SY80 951 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 CACHD1Q5VU97 1274 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 CES4AQ5XG92 561 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 ARHGAP22Q7Z5H3 698 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 PAQR7Q86WK9 346 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 FAM129CQ86XR2 697 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 C19orf47Q8N9M1 422 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 OR52B6Q8NGF0 335 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 TRPC4APQ8TEL6 797 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 KLHL6Q8WZ60 621 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 PTCD3Q96EY7 689 aaKnown RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 SLC41A2Q96JW4 573 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 MAGEB10Q96LZ2 347 aaPredicted RBP16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 PLCD4Q9BRC7 762 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 EFCAB11Q9BUY7 163 aa16.3■□□□□ 0.2
PRKCSH-203ENST00000586486 KLHL3Q9UH77 587 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms