RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 TRIM73Q86UV7 250 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SERPINA9Q86WD7 417 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 KMT5CQ86Y97 462 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 APLFQ8IW19 511 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 PIANPQ8IYJ0 282 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ENDOVQ8N8Q3 282 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 LMNTD1Q8N9Z9 388 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ACRBPQ8NEB7 543 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ACVR1CQ8NER5 493 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 OR52E1Q8NGJ3 308 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.02□□□□□ -1.45
NUP88-212ENST00000576708 HM13Q8TCT9 377 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 LCN9Q8WX39 176 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 CLIP3Q96DZ5 547 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 LINC00615Q96LM1 132 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 SPATA13Q96N96 652 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 FCRL4Q96PJ5 515 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 COPS8Q99627 209 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 ZFYVE21Q9BQ24 234 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 CCM2Q9BSQ5 444 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 HGH1Q9BTY7 390 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 TUBB2BQ9BVA1 445 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 GPR87Q9BY21 358 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 OR52A5Q9H2C5 316 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 CDIP1Q9H305 208 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SRMSQ9H3Y6 488 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 IPPKQ9H8X2 491 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 COG4Q9H9E3 785 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 POMT2Q9UKY4 750 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 PACSIN2Q9UNF0 486 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 R3HDM2Q9Y2K5 976 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 AAR2Q9Y312 384 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.02□□□□□ -1.45
NUP88-212ENST00000576708 EPN1Q9Y6I3 576 aaPredicted RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 COLEC10Q9Y6Z7 277 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 TNRC6AQ8NDV7 1962 aaKnown RBP6.02□□□□□ -1.45
NUP88-212ENST00000576708 COL12A1Q99715 3063 aa6.02□□□□□ -1.45
NUP88-212ENST00000576708 SPENQ96T58 3664 aaKnown RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 GRID2IPA4D2P6 1211 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 TMEM150CB9EJG8 249 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 MASP2O00187 686 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 AQP7O14520 342 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZNF185O15231 689 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RNF224P0DH78 156 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 TPBGLP0DKB5 382 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CBSLP0DN79 551 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RALBP11234 206 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 COL6A2P12110 1019 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ITGALP20701 1170 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ACRV1P26436 265 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CALRP27797 417 aaKnown RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 NDUFS1P28331 727 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PTPN7P35236 360 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RORAP35398 523 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CBSP35520 551 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CYLC1P35663 651 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 CSE1LP55060 971 aaKnown RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 ITGA1P56199 1179 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RWDD2BP57060 319 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PDE1BQ01064 536 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PRKAA1Q13131 559 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 RAPSNQ13702 412 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZIC1Q15915 447 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 DEFB110Q30KQ9 67 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CCDC38Q502W7 563 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 TMTC4Q5T4D3 741 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 C1orf189Q5VU69 101 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 KCTD11Q693B1 232 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CYB5D1Q6P9G0 228 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SARM1Q6SZW1 724 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PAQR3Q6TCH7 311 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 FAM198BQ6UWH4 519 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZNF517Q6ZMY9 492 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 CDHR3Q6ZTQ4 885 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SYVN1Q86TM6 617 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 PRUNE1Q86TP1 453 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CCDC170Q8IYT3 715 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ADGRF3Q8IZF5 1079 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 DSELQ8IZU8 1212 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZBTB2Q8N680 514 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 LRRC57Q8N9N7 239 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 FAM71DQ8N9W8 422 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 FDCSPQ8NFU4 85 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 OR5AR1Q8NGP9 310 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ADAMTS17Q8TE56 1095 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZFPM2Q8WW38 1151 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 THAP4Q8WY91 577 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ULK4Q96C45 1275 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 CDKN2AIPNLQ96HQ2 116 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 TRAPPC9Q96Q05 1148 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SLC25A23Q9BV35 468 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SPRTNQ9H040 489 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 ING2Q9H160 280 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 EPB41L4BQ9H329 900 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ZNF552Q9H707 407 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 ACTR5Q9H9F9 607 aaPredicted RBP6.01□□□□□ -1.45
NUP88-212ENST00000576708 ARNT2Q9HBZ2 717 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 FAM60AQ9NP50 221 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 ACSS2Q9NR19 701 aa6.01□□□□□ -1.45
NUP88-212ENST00000576708 SPHK1Q9NYA1 384 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms