RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 LOC102723996A0A087X1L8 192 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 HYKKA2RU49 373 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ASPDHA6ND91 283 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 TMEM200CA6NKL6 621 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 CST8O60676 142 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 WFS1O76024 890 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 SLCO2B1O94956 709 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 AP2A2O94973 939 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 H2AFZP0C0S5 128 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 TCP1P17987 556 aaKnown RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 KLK2P20151 261 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 FBLP22087 321 aaKnown RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 PSMB5P28074 263 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ST13P50502 369 aaKnown RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 EMP2P54851 167 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 OCA2Q04671 838 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ZNF33BQ06732 778 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 GPR33Q49SQ1 333 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ZC3H12BQ5HYM0 836 aaKnown RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 WASHC2DQ5SRD0 308 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ABHD17BQ5VST6 288 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 LRRC38Q5VT99 294 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 PRMT9Q6P2P2 845 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 H2AFVQ71UI9 128 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ZNF572Q7Z3I7 529 aaPredicted RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 DOLPP1Q86YN1 238 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 VRK3Q8IV63 474 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 CTNNBL1Q8WYA6 563 aaPredicted RBP9.41□□□□□ -0.9
TPM1-225ENST00000560679 SDCCAG3Q96C92 435 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 IMMP1LQ96LU5 166 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 SIGLEC12Q96PQ1 595 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 VAT1Q99536 393 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 C19orf43Q9BQ61 176 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ZNF700Q9H0M5 742 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 C10orf88Q9H8K7 445 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 ABCA4P78363 2273 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 GTF3C1Q12789 2109 aa9.41□□□□□ -0.9
TPM1-225ENST00000560679 LOC105369274A0A096LPK9 316 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 LOC102723532A0A0G2JNH3 316 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 NPIPA5E9PKD4 350 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 E9PLN8 166 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 H7C0S8 307 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 CRTAMO95727 393 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 S1PR4O95977 384 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 TUBBP07437 444 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 CD9P21926 228 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 PSMB4P28070 264 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 GEMP55040 296 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 FOXD4Q12950 439 aaPredicted RBP9.4□□□□□ -0.9
TPM1-225ENST00000560679 TUBA3CQ13748 450 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 DSG2Q14126 1118 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 PRTGQ2VWP7 1150 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 FAM214AQ32MH5 1076 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 SYTL3Q4VX76 610 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 KAZNQ674X7 775 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 TUBA3EQ6PEY2 450 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 TMEM205Q6UW68 189 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 RNF44Q7L0R7 432 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 OR4N4Q8N0Y3 316 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 BEST3Q8N1M1 668 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 MARVELD2Q8N4S9 558 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 AMER3Q8N944 861 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 CA5BP1Q8WTZ4 195 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 SCMH1Q96GD3 660 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 NPAS2Q99743 824 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 FOXC2Q99958 501 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 VKORC1Q9BQB6 163 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 PARD6BQ9BYG5 372 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 ANKZF1Q9H8Y5 726 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 INTS7Q9NVH2 962 aaKnown RBP9.4□□□□□ -0.9
TPM1-225ENST00000560679 ZNF446Q9NWS9 450 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 SMARCAL1Q9NZC9 954 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.4□□□□□ -0.9
TPM1-225ENST00000560679 TRHDEQ9UKU6 1024 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 RAB21Q9UL25 225 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 INTUQ9ULD6 942 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 NPIPA1Q9UND3 350 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 RPH3AQ9Y2J0 694 aaPredicted RBP9.4□□□□□ -0.9
TPM1-225ENST00000560679 ASB1Q9Y576 335 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 KLK4Q9Y5K2 254 aa9.4□□□□□ -0.9
TPM1-225ENST00000560679 CCDC151A5D8V7 595 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 KRT87PA6NCN2 255 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 OR51F1A6NGY5 319 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 ATP8B1O43520 1251 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 MAN1A2O60476 641 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 ANXA9O76027 345 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 FTH1P02794 183 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 CXCR2P25025 360 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 MSX1P28360 303 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 RBL1P28749 1068 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 CSE1LP55060 971 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 NAP1L1P55209 391 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 SNRPNP63162 240 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 YBX1P67809 324 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 ALDH6A1Q02252 535 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 SF1Q15637 639 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 KRTCAP3Q53RY4 240 aa9.39□□□□□ -0.91
TPM1-225ENST00000560679 DNAJC21Q5F1R6 531 aaKnown RBP9.39□□□□□ -0.91
TPM1-225ENST00000560679 RNFT1Q5M7Z0 435 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms