RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 TRAPPC9Q96Q05 1148 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 NRTNQ99748 197 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 AIF1LQ9BQI0 150 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 DPH7Q9BTV6 452 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 DRC3Q9H069 523 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 ZNF768Q9H5H4 540 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 TMEM9Q9P0T7 183 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 COPG2Q9UBF2 871 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 BTRCQ9Y297 605 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 STK38LQ9Y2H1 464 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 KLK4Q9Y5K2 254 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 MDC1Q14676 2089 aaKnown RBP7.35□□□□□ -1.23
TDP1-214ENST00000556063 VPS13AQ96RL7 3174 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 PTPRBP23467 1997 aa7.35□□□□□ -1.23
TDP1-214ENST00000556063 IGHV5-51A0A0C4DH38 117 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 EFCAB7A8K855 629 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 A8MT66 165 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 B4E171 279 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 H3BQF6 201 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 H7BY64 318 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 AGPSO00116 658 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TXNDC9O14530 226 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PLD2O14939 933 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PRPF4O43172 522 aaKnown RBP eCLIP7.34□□□□□ -1.23
TDP1-214ENST00000556063 TYROBPO43914 113 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 DLX3O60479 287 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 SRPX2O60687 465 aaPredicted RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 TRIM13O60858 407 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 SUPT7LO94864 414 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 MSL3P1P0C860 447 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 C1GALT1C1LP0DN25 315 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PVRP15151 417 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 EZRP15311 586 aaKnown RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 IMPDH1P20839 514 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PSMB5P28074 263 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RBMS1P29558 406 aaKnown RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 EEF1DP29692 281 aaKnown RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 ARL1P40616 181 aaPredicted RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 TSPAN7P41732 249 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 GRIA3P42263 894 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 GDF5P43026 501 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 AGTR2P50052 363 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RAB15P59190 212 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 DNAJB13P59910 316 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RPS15AP62244 130 aaKnown RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 HERVK_113P63132 956 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 IRF8Q02556 426 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 FOXM1Q08050 763 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 LAPTM5Q13571 262 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 GTF2H2Q13888 395 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 IL11RAQ14626 422 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 C16orf72Q14CZ0 275 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 HIST2H2ACQ16777 129 aaPredicted RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 HHATQ5VTY9 493 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 KIAA1614Q5VZ46 1190 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 HIST2H2AA3Q6FI13 130 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 GTF2H2CQ6P1K8 395 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 NXPE4Q6UWF7 544 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TMPRSS9Q7Z410 1059 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TMPRSS11BQ86T26 416 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 GPR135Q8IZ08 494 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 LSMEM2Q8N112 164 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 KRT78Q8N1N4 520 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 D2HGDHQ8N465 521 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TMEM151AQ8N4L1 468 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TEX9Q8N6V9 391 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 CCNYL1Q8N7R7 359 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ABHD11Q8NFV4 315 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PPP1R14CQ8TAE6 165 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 FLVCR1-AS1Q8TAF5 88 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 UBE2E3Q969T4 207 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RERGQ96A58 199 aaPredicted RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 ESAMQ96AP7 390 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ZBTB9Q96C00 473 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PRAP1Q96NZ9 151 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TEFMQ96QE5 360 aaKnown RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 SH3GL2Q99962 352 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 SELENOSQ9BQE4 189 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PLCD4Q9BRC7 762 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 TMEM79Q9BSE2 394 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 EFCAB11Q9BUY7 163 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 C1QTNF3Q9BXJ4 246 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ERVK-6Q9BXR3 956 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 NLNQ9BYT8 704 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ASPSCR1Q9BZE9 553 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PITHD1Q9GZP4 211 aaPredicted RBP7.34□□□□□ -1.23
TDP1-214ENST00000556063 KLHL25Q9H0H3 589 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 EHD1Q9H4M9 534 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 ACTR8Q9H981 624 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 POLR1BQ9H9Y6 1135 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PELI2Q9HAT8 420 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PRM3Q9NNZ6 103 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 MED4Q9NPJ6 270 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 FGF21Q9NSA1 209 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 IRAK4Q9NWZ3 460 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 SERTAD3Q9UJW9 196 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 RARRES3Q9UL19 164 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 EMCNQ9ULC0 261 aa7.34□□□□□ -1.23
TDP1-214ENST00000556063 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms