RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 POU1F1P28069 291 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 OXTRP30559 389 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CORO1AP31146 461 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FMO4P31512 558 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 UBA7P41226 1012 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GDF5P43026 501 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ABCG1P45844 678 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CPA2P48052 419 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CSRP3P50461 194 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ELLP55199 621 aaPredicted RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 MAP3K7CLP57077 242 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 DAOAP59103 153 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ERVPABLB-1P60509 514 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PFN3P60673 137 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RPL7AP62424 266 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RPS24P62847 133 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 YWHAZP63104 245 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 HSF1Q00613 529 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GOLGA8DPQ0D2H9 430 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 DCTN2Q13561 401 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 STIM1Q13586 685 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ALCAMQ13740 583 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 LAMB3Q13751 1172 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PKP1Q13835 747 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 LY6DQ14210 128 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ERV3-1Q14264 604 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GSTA3Q16772 222 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 KNOP1Q1ED39 458 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ISXQ2M1V0 245 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PRICKLE4Q2TBC4 344 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CBWD6Q4V339 395 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SLC9B1Q4ZJI4 515 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CBWD3Q5JTY5 395 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 UBAP2Q5T6F2 1119 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 HES3Q5TGS1 186 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 VWA5B1Q5TIE3 1220 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SYPL2Q5VXT5 272 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 BSPRYQ5W0U4 402 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FCRLBQ6BAA4 426 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 NAPEPLDQ6IQ20 393 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM81Q6P7N7 255 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RFWD3Q6PCD5 774 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 IL27RAQ6UWB1 636 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 LRIG3Q6UXM1 1119 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GSTA5Q7RTV2 222 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PRSS45Q7RTY3 260 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TADA2BQ86TJ2 420 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM110Q86TL2 294 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 IQCHQ86VS3 1027 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TRIM69Q86WT6 500 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SFTPA2Q8IWL1 248 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FAM185AQ8N0U4 392 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 HDDC3Q8N4P3 179 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TMEM217Q8N7C4 229 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PDILTQ8N807 584 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CCDC89Q8N998 374 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 XXYLT1Q8NBI6 393 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SETD9Q8NE22 299 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 OR2A12Q8NGT7 310 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 OR2T34Q8NGX1 318 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 OR4C6Q8NH72 309 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 BCAS4Q8TDM0 211 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TAF4BQ92750 862 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SMARCE1Q969G3 411 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CENPTQ96BT3 561 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 BICD1Q96G01 975 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 MED8Q96G25 268 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 KLHL15Q96M94 604 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SLITRK1Q96PX8 696 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 GCNAQ96QF7 691 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FRG2BQ96QU4 278 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 NR1H4Q96RI1 486 aaPredicted RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TM2D2Q9BX73 214 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 KRTAP4-9Q9BYQ8 210 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RAB34Q9BZG1 259 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 TNMDQ9H2S6 317 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FBXO44Q9H4M3 255 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 MRPL44Q9H9J2 332 aaKnown RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CYP3A43Q9HB55 503 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 SGK2Q9HBY8 427 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 Q9N2J8 555 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ABCB8Q9NUT2 735 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PANK4Q9NVE7 773 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 HAUS2Q9NVX0 235 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 UPB1Q9UBR1 384 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 IL17BQ9UHF5 180 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ZNHIT2Q9UHR6 403 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RCOR1Q9UKL0 485 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 CA5BQ9Y2D0 317 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 PSAT1Q9Y617 370 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 RP1L1Q8IWN7 2480 aaPredicted RBP2.35□□□□□ -2.03
CPSF6-207ENST00000551516 FBN3Q75N90 2809 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 NAV3Q8IVL0 2385 aa2.35□□□□□ -2.03
CPSF6-207ENST00000551516 ZNF638Q14966 1978 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 F8P00451 2351 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SPTY2D1-AS1A0A0U1RR47 76 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 SLC22A23A1A5C7 686 aa2.34□□□□□ -2.03
CPSF6-207ENST00000551516 TARSL2A2RTX5 802 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 PABPN1LA6NDY0 278 aaKnown RBP2.34□□□□□ -2.03
CPSF6-207ENST00000551516 CXorf65A6NEN9 183 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms