RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 REXO5Q96IC2 774 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 TEX37Q96LM6 180 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZSCAN5AQ9BUG6 496 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 TEX12Q9BXU0 123 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 DUSP16Q9BY84 665 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 POLR1EQ9GZS1 481 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 SLIRPQ9GZT3 109 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 EXOSC4Q9NPD3 245 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 ARL15Q9NXU5 204 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 SCN3BQ9NY72 215 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 AKAP7Q9P0M2 348 aaPredicted RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 ERVK-18Q9QC07 812 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZNF221Q9UK13 617 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CDH9Q9ULB4 789 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 EIF3LQ9Y262 564 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 INVSQ9Y283 1065 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 VPS9D1Q9Y2B5 631 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 GREB1Q4ZG55 1949 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 A0A1W2PQ72 361 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 A0A1W2PRU2 124 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CIB4A0PJX0 185 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 IQCF5A8MTL0 148 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ISM1B1AKI9 464 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 BTN3A1O00481 513 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 SCO2O43819 266 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CPNE3O75131 537 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 CNTN5O94779 1100 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CD1DP15813 335 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZNF7P17097 686 aaPredicted RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 CCNCP24863 283 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 RYKP34925 604 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ADRA1AP35348 466 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZFP36L2P47974 494 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 CDKN2DP55273 166 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 MTPNP58546 118 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZNF33AQ06730 810 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ABRQ12979 859 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 LCP2Q13094 533 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 TRAF3Q13114 568 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CDK5R2Q13319 367 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 PPIGQ13427 754 aaKnown RBP eCLIP5.1□□□□□ -1.59
PROM1-220ENST00000540805 KRR1Q13601 381 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 TP53BP2Q13625 1128 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 SELPLGQ14242 412 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CLCA4Q14CN2 919 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 AP5B1Q2VPB7 878 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ATP6AP1LQ52LC2 224 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 SOWAHCQ53LP3 525 aaPredicted RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 STEAP3Q658P3 488 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 TMEM207Q6UWW9 146 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ARHGAP36Q6ZRI8 547 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CACTIN-AS1Q8N1I8 211 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 KRT78Q8N1N4 520 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CPA6Q8N4T0 437 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 C3orf58Q8NDZ4 430 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 OR5K1Q8NHB7 308 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 METTL6Q8TCB7 284 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CXorf40AQ8TE69 158 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CXorf40BQ96DE9 158 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 NEDD4LQ96PU5 975 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 DEPDC7Q96QD5 511 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 BRINP2Q9C0B6 783 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 MCCC2Q9HCC0 563 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 GKN1Q9NS71 199 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 IMP3Q9NV31 184 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 C14orf119Q9NWQ9 140 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 TOR4AQ9NXH8 423 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 QPCTLQ9NXS2 382 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 ZIM2Q9NZV7 527 aa5.1□□□□□ -1.59
PROM1-220ENST00000540805 CRNNQ9UBG3 495 aaPredicted RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 CDV3Q9UKY7 258 aaKnown RBP5.1□□□□□ -1.59
PROM1-220ENST00000540805 SEC16AO15027 2179 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 A0A1W2PQH9 124 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 GRXCR2A6NFK2 248 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TRIM77I1YAP6 450 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TSPAN4O14817 238 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TFECO14948 347 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 KCNJ13O60928 360 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 SLC25A14O95258 325 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 FADS2O95864 444 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 MT-ND2P03891 347 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 IFNA16P05015 189 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 CYP11A1P05108 521 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 SLC2A4P14672 509 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 FMO3P31513 532 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 CLK1P49759 484 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 SNRPD1P62314 119 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 MVKQ03426 396 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 GPM6BQ13491 265 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 LAPTM5Q13571 262 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 GRM7Q14831 915 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 TRIP4Q15650 581 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 TRIM71Q2Q1W2 868 aaKnown RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 ZNF404Q494X3 552 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 SYT6Q5T7P8 510 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 GALNT7Q86SF2 657 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 CIR1Q86X95 450 aaPredicted RBP5.09□□□□□ -1.59
PROM1-220ENST00000540805 CILP2Q8IUL8 1156 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 ADHFE1Q8IWW8 467 aa5.09□□□□□ -1.59
PROM1-220ENST00000540805 KREMEN2Q8NCW0 462 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms