RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 CDH3P22223 829 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 GRIA3P42263 894 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 SPIDRQ14159 915 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 CATSPEREQ5SY80 951 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 PRAMEF9Q5VWM5 478 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 SLCO4C1Q6ZQN7 724 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 CARFQ8N187 725 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 OR52B6Q8NGF0 335 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 PPP1R14CQ8TAE6 165 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 TRPC4APQ8TEL6 797 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 DPH7Q9BTV6 452 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 TRMOQ9BU70 441 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 NTMT1Q9BV86 223 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 SEMA6CQ9H3T2 930 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 SEMA5BQ9P283 1151 aa23.33■■□□□ 1.32
HMGA2-208ENST00000537429 D6RAR5 112 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 CLGNO14967 610 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 DKK1O94907 266 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 MLYCDO95822 493 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 CDH1P12830 882 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 MAGP20916 626 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 GRK2P25098 689 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 MPSTP25325 297 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 SERPINB5P36952 375 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 E2F2Q14209 437 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 SNAP47Q5SQN1 464 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 NXPE4Q6UWF7 544 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 TMPRSS11BQ86T26 416 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 TRIM42Q8IWZ5 723 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 RAB3IL1Q8TBN0 382 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 DYDC1Q8WWB3 177 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 TRAPPC9Q96Q05 1148 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 DRC3Q9H069 523 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 EHD1Q9H4M9 534 aa23.32■■□□□ 1.32
HMGA2-208ENST00000537429 CEP250Q9BV73 2442 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 H7BY64 318 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 GIPC1O14908 333 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 RASSF9O75901 435 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 WFS1O76024 890 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 PVRP15151 417 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 ST6GAL1P15907 406 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 HRH2P25021 359 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 CCR10P46092 362 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 LCP2Q13094 533 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 RCN2Q14257 317 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF425Q6IV72 752 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 SLCO6A1Q86UG4 719 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 OR4K1Q8NGD4 311 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 ZUFSPQ96AP4 578 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 WDR34Q96EX3 536 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 PRAP1Q96NZ9 151 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 MANSC1Q9H8J5 431 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 TMEM184CQ9NVA4 438 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 APOBEC2Q9Y235 224 aaKnown RBP23.31■■□□□ 1.32
HMGA2-208ENST00000537429 KLHL20Q9Y2M5 609 aa23.31■■□□□ 1.32
HMGA2-208ENST00000537429 COL27A1Q8IZC6 1860 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 IGHV5-51A0A0C4DH38 117 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 IGHV5-10-1A0A0J9YXX1 117 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 A0A1B0GTL3 188 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 UBFD1O14562 309 aaKnown RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 TOX3O15405 576 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 OTCP00480 354 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 FTH1P19P0C7X4 201 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 C1GALT1C1LP0DN25 315 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CDK4P11802 303 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ARRB2P32121 409 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CASP2P42575 452 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CCNG1P51959 295 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 INSM1Q01101 510 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 IRF8Q02556 426 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 GALNT1Q10472 559 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 TRAF3Q13114 568 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CHIT1Q13231 466 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 STX3Q13277 289 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 TBCCQ15814 346 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CACHD1Q5VU97 1274 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ATG9BQ674R7 924 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 FIGLAQ6QHK4 219 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ATG14Q6ZNE5 492 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 PRSS42Q7Z5A4 293 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 FAM129CQ86XR2 697 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 SLITRK4Q8IW52 837 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 LSMEM2Q8N112 164 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 CKAP2Q8WWK9 683 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF75CPQ92670 426 aaPredicted RBP23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ATP6V1E2Q96A05 226 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF382Q96SR6 550 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 PLCD4Q9BRC7 762 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 RTKNQ9BST9 563 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 PELI2Q9HAT8 420 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ANKMY1Q9P2S6 941 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 ZNF225Q9UK10 706 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 SNX7Q9UNH6 387 aa23.3■■□□□ 1.32
HMGA2-208ENST00000537429 SLC9B1P1A6NJY1 282 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 TMEM114B3SHH9 223 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 KLF11O14901 512 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 THRAP10827 490 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 CCR8P51685 355 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 SH3BP2P78314 561 aa23.29■■□□□ 1.32
HMGA2-208ENST00000537429 CSNK1G2P78368 415 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms