RNA–Protein interactions for RNA: ENST00000534254.5

CHID1-224, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 1,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-224ENST00000534254 OTOAQ7RTW8 1153 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 SLC13A5Q86YT5 568 aaPredicted RBP12.9□□□□□ -0.34
CHID1-224ENST00000534254 SYCE1Q8N0S2 351 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 MFSD3Q96ES6 412 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 BAG1Q99933 345 aaPredicted RBP12.9□□□□□ -0.34
CHID1-224ENST00000534254 SLX1AQ9BQ83 275 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 TREX1Q9NSU2 369 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 OLAHQ9NV23 265 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 TRPC4Q9UBN4 977 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 ZNF282Q9UDV7 671 aaPredicted RBP12.9□□□□□ -0.34
CHID1-224ENST00000534254 TAC3Q9UHF0 121 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 RUVBL1Q9Y265 456 aaKnown RBP12.9□□□□□ -0.34
CHID1-224ENST00000534254 CRYL1Q9Y2S2 319 aa12.9□□□□□ -0.34
CHID1-224ENST00000534254 MRPS2Q9Y399 296 aaKnown RBP12.9□□□□□ -0.34
CHID1-224ENST00000534254 PDZD2O15018 2839 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 A0A0A6YYC8 382 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 NSG1A0A0A6YYJ2 146 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 IGKV1-8A0A0C4DH67 115 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 OR2A25A4D2G3 310 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 IDSB3KWA1 339 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 F8W8V4 182 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 I3L1I5 382 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 P2RX6O15547 441 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 ZNF189O75820 626 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 VAPBO95292 243 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 PRR35P0CG20 571 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 STIP1P31948 543 aaKnown RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 KCNJ1P48048 391 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 TTPAP49638 278 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 TDGF1P3P51864 188 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 EMP2P54851 167 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 SIX1Q15475 284 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 PRTGQ2VWP7 1150 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 AARS2Q5JTZ9 985 aaKnown RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 PCID2Q5JVF3 399 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 YOD1Q5VVQ6 348 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 SP5Q6BEB4 398 aaPredicted RBP12.89□□□□□ -0.35
CHID1-224ENST00000534254 TICAM1Q8IUC6 712 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 CSNK1A1LQ8N752 337 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 AMER3Q8N944 861 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 CCDC89Q8N998 374 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 SPC24Q8NBT2 197 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 ZUFSPQ96AP4 578 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 MRFAP1L1Q96HT8 127 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 BIRC8Q96P09 236 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 PANX3Q96QZ0 392 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 SLC30A3Q99726 388 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 ZFYVE21Q9BQ24 234 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 RAB11FIP5Q9BXF6 653 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 DCHS2Q6V1P9 2916 aa12.89□□□□□ -0.35
CHID1-224ENST00000534254 OR2W5A6NFC9 320 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 SRPX2O60687 465 aaPredicted RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 MST1P26927 711 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 CMPK1P30085 196 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 SOX11P35716 441 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 PPARGP37231 505 aaPredicted RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 VPS41P49754 854 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 PER3P56645 1201 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 CUL1Q13616 776 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 TRIP13Q15645 432 aaPredicted RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 MUM1Q2TAK8 710 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 ATG9BQ674R7 924 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 FCRLBQ6BAA4 426 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 LRRC8BQ6P9F7 803 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 LANCL3Q6ZV70 420 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 KBTBD2Q8IY47 623 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 MPP5Q8N3R9 675 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 BCORP1Q8N888 145 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 LPGAT1Q92604 370 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 MMABQ96EY8 250 aaPredicted RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 CALR3Q96L12 384 aaKnown RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 MACROD1Q9BQ69 325 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.88□□□□□ -0.353e-7■■■■□ 20.6
CHID1-224ENST00000534254 MRPS30Q9NP92 439 aaKnown RBP12.88□□□□□ -0.35
CHID1-224ENST00000534254 PAK5Q9P286 719 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 PCYOX1Q9UHG3 505 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 GUCA1BQ9UMX6 200 aa12.88□□□□□ -0.35
CHID1-224ENST00000534254 ANKRD17O75179 2603 aaKnown RBP12.87□□□□□ -0.35
CHID1-224ENST00000534254 IGHV1-45A0A0A0MS14 117 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 TRGV8A0A0C4DH27 118 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 DYTNA2CJ06 578 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 HAT1O14929 419 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 ZNHIT1O43257 154 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 FOXS1O43638 330 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 WDPCPO95876 746 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 HEXBP07686 556 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 STSP08842 583 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 RPS3P23396 243 aaKnown RBP eCLIP12.87□□□□□ -0.351e-6■■□□□ 14.1
CHID1-224ENST00000534254 RPA3P35244 121 aaPredicted RBP12.87□□□□□ -0.35
CHID1-224ENST00000534254 CARSP49589 748 aaKnown RBP12.87□□□□□ -0.35
CHID1-224ENST00000534254 TNFSF10P50591 281 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 PCOLCEQ15113 449 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 ZNF324BQ6AW86 544 aaPredicted RBP12.87□□□□□ -0.35
CHID1-224ENST00000534254 GFRALQ6UXV0 394 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 NDUFAF7Q7L592 441 aa12.87□□□□□ -0.35
CHID1-224ENST00000534254 PRSS41Q7RTY9 318 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms